Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20abies_20[ConGenIE_20PRJEB1822-1.0_202015-05-12] 10,253,695 sequences; 12,301,475,675 total letters Query= NC_023503.1 Length=48800 Score E Sequences producing significant alignments: (Bits) Value seq18119 93.3 1e-14 >seq18119 Length=41157 Score = 93.3 bits (102), Expect = 1e-14 Identities = 261/394 (66%), Gaps = 10/394 (3%) Strand=Plus/Minus Query 2521 TACCCAATCATCACTATCGAAGATGGTATGGACGAAAACGACTGGGACGGTTGGAAATCT 2580 || || ||| || | ||||| || || |||| |||| ||||| ||| || ||||| Sbjct 5885 TATCCGATCGTCTCCATCGAGGACGGCATGGCCGAAGACGACATGGATGGCTGGAAGGA- 5827 Query 2581 CTTACTGAACGTCTTGGT-GGTA--AAGTTCAAT-TGGTTGGTGACGACTTCTTCGTAAC 2636 ||||| || | || | || | |||| | | | || ||||||||| | ||||| || Sbjct 5826 ---ACTGACCGACCTGATCGGCAGCAAGTGCCAGCTTGTCGGTGACGACCTGTTCGTGAC 5770 Query 2637 TAACACTGCTTACCTTGAAAAAGGTATTGCAGAACACGCT-GCTAACTCAATCCTTATCA 2695 ||| | ||||| | || || |||| || | || || || || | | Sbjct 5769 CAACGTCACGCGCCTTGCGGATGGCATCA-AGAAGGGCCTCGGCAATTCCATTCTGGTGA 5711 Query 2696 AAGTTAACCAAATCGGTACTTTGACTGAAACTTTTGACGCTATCGAAATGGCGAAAGAAG 2755 | || ||||| ||||| | | || || || | | ||| ||||||||||| | | | Sbjct 5710 AGGTCAACCAGATCGGCTCGCTCACCGAGACGCTCGCCGCCGTCGAAATGGCGCACAAGG 5651 Query 2756 CTGGATACACAGCAGTAGTATCACACCGTTCAGGTGAAACTGAAGATTCAACAATCGCTG 2815 | | ||||| || || | || ||||| || || || || ||||| || || ||||| | Sbjct 5650 CGGCCTACACCGCCGTGATGTCGCACCGCTCCGGCGAGACCGAAGACTCGACCATCGCCG 5591 Query 2816 ATATTGCAGTTGCAACTAACGCTGGTCAAATTAAGACAGGTTCATTGTCACGTACTGACC 2875 || | || || || || ||| |||||| || ||||| || || || | || | || | Sbjct 5590 ATCTCGCCGTCGCCACCAACTGTGGTCAGATCAAGACCGGATCGCTGGCGCGCGCGGATC 5531 Query 2876 GTATTGCTAAATACAACCAATTGCTTCGTATCGA 2909 | | || || |||||||| ||||| || ||||| Sbjct 5530 GCACGGCGAAGTACAACCAGTTGCTGCGCATCGA 5497 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 137038754327580