Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20abies_20[ConGenIE_20PRJEB1822-1.0_202015-05-12] 10,253,695 sequences; 12,301,475,675 total letters Query= NC_031120.1 Length=241147 Score E Sequences producing significant alignments: (Bits) Value seq94137 152 7e-32 seq6710082 87.8 2e-12 >seq94137 Length=18398 Score = 152 bits (168), Expect = 7e-32 Identities = 219/306 (72%), Gaps = 2/306 (1%) Strand=Plus/Minus Query 196058 ATAAGTAACATGCATCAGTATCACGAACTCTTACAGCAGGTGCTCAGTATCGGCCACGAC 196117 ||| || |||| | ||||||||||| || | | | | ||||| |||| || Sbjct 9068 ATAGGTCCCATGAACCAGTATCACGACCTGCTCGAACGCATCCTCAGCGACGGCGCGGAA 9009 Query 196118 AAAGCTGACCGTACCGGCACAGGCACTACGTCCTATCT-CGGCGCACAGATGCGCTTCGA 196176 || | ||||| |||||||| || || ||| |||| |||| |||||||| ||| | Sbjct 9008 AAGACCGACCGCACCGGCACCGGGACACTGTCG-ATCTTCGGCCATCAGATGCGGTTCAA 8950 Query 196177 TCTGCAAGACGGATTCCCGCTGGTCACCACGAAGAAACTCCATCTGCGTTCCATCATTCA 196236 |||| | || ||||||||| | || || ||||| || |||||| || ||| | || Sbjct 8949 TCTGGCATCGGGTTTCCCGCTGCTGACAACCAAGAAGCTTCATCTGAAGTCGATCGTCCA 8890 Query 196237 TGAACTGCTGTGGTTCCTCAACGGGGACACCAACATCAAGTACCTGAATGACAACGGTGT 196296 |||||||||||||| || || |||||||||||||| |||||||| |||||||| || Sbjct 8889 CGAACTGCTGTGGTTTCTGGCGGGTGACACCAACATCAAATACCTGAACGACAACGGCGT 8830 Query 196297 CTCTATCTGGAACGAGTGGGCGAACGAACTCGGTAACCTGGGGCCGGTTTACGGTAAGCA 196356 || ||| |||||||||| |||| ||| || || || ||||| || || ||| Sbjct 8829 TCGCATTTGGGACGAGTGGGCTGACGAGAACGGCAATCTCGGCCCGGTCTATGGCTCGCA 8770 Query 196357 GTGGCG 196362 |||||| Sbjct 8769 GTGGCG 8764 >seq6710082 Length=265 Score = 87.8 bits (96), Expect = 2e-12 Identities = 65/76 (86%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 4206 TGTAGTTCAGTTGGTAGAACGGTGGACTGTTAATCCATATGTCGCAGGTTCGAGTCCTGC 4265 ||||||||||| |||||||||| ||||||||||||| |||||| | ||||||||||| | Sbjct 104 TGTAGTTCAGTCGGTAGAACGGCGGACTGTTAATCCGTATGTCACTGGTTCGAGTCCAGT 163 Query 4266 CAGGGTCGCCACATTT 4281 ||| | |||| |||| Sbjct 164 CAGAGGAGCCAGATTT 179 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 672652894385400