Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20glauca_20[genbank_20GCA_5F000411955.5_202016-01-12] 3,033,322 sequences; 24,633,077,211 total letters Query= AAMG01000370.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq2803466 84.2 2e-14 seq995084 78.8 9e-13 seq1898082 73.4 4e-11 >seq2803466 Length=2998 Score = 84.2 bits (92), Expect = 2e-14 Identities = 125/175 (71%), Gaps = 2/175 (1%) Strand=Plus/Minus Query 6 ACGGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACG 65 ||||||||| ||||||| | | ||| ||| ||||| |||| ||||| ||||| ||| || Sbjct 1976 ACGGTGGATACCTAGGCACCCAGAGACGAGGAAGGGCGTGGTAAGCGACGAAATGCTTCG 1917 Query 66 GGGATTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCCGATATATTGGA 125 |||| | | | || | || ||||| |||| |||||| || |||| | |||| Sbjct 1916 GGGAGTTGAAAATGAGCATAGATCCAGAGATTCCCGAATAGGTTAACCTTTTTAATTGTT 1857 Query 126 GATATATCATAACGCTAGGCGTTAGGCGAACGTGGGGAACTGAAACATCTAAGTA 180 | | ||| | | ||||| || | ||| ||| |||||||||||||| |||| Sbjct 1856 GCTTAATCC-ATGGGTAGGCAAGAGAC-AACCTGGAGAACTGAAACATCTTAGTA 1804 >seq995084 Length=2791 Score = 78.8 bits (86), Expect = 9e-13 Identities = 124/175 (71%), Gaps = 2/175 (1%) Strand=Plus/Minus Query 6 ACGGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACG 65 ||||||||| ||||||| | | ||| ||| ||||| |||| ||||| ||||| ||| || Sbjct 1769 ACGGTGGATACCTAGGCACCCAGAGACGAGGAAGGGCGTGGTAAGCGACGAAATGCTTCG 1710 Query 66 GGGATTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCCGATATATTGGA 125 |||| | | | || | || ||||| |||| |||||| || |||| | | || Sbjct 1709 GGGAGTTGAAAATGAGCATAGATCCAGAGATTCCCGAATAGGTTAACCTTTTTAACTGTT 1650 Query 126 GATATATCATAACGCTAGGCGTTAGGCGAACGTGGGGAACTGAAACATCTAAGTA 180 | | ||| | | ||||| || | ||| ||| |||||||||||||| |||| Sbjct 1649 GCTTAATCC-ATGGGTAGGCAAGAGAC-AACCTGGAGAACTGAAACATCTTAGTA 1597 >seq1898082 Length=53401 Score = 73.4 bits (80), Expect = 4e-11 Identities = 84/109 (77%), Gaps = 3/109 (3%) Strand=Plus/Plus Query 8 GGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACGGG 67 ||||||||||| ||| || ||||||| |||||||||| ||| ||||||||||| ||| Sbjct 27368 GGTGGATGCCTTGGCAATCAGAGGCGATGAAGGACGTGCTAATCTGCGAAAAGCGTCGGT 27427 Query 68 GATTGGCACAT-ACGAATT-GATCCGTAGATATCCGAATGGGGCAACCC 114 | | | | || | | || | ||| ||||||||||||||| ||||| Sbjct 27428 AAGTTG-ATATGAGGCGTTATAACCGGCGATATCCGAATGGGGAAACCC 27475 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462789085682