Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20glauca_20[genbank_20GCA_5F000411955.5_202016-01-12] 3,033,322 sequences; 24,633,077,211 total letters Query= AAMG01001946.1 Length=179 Score E Sequences producing significant alignments: (Bits) Value seq1898082 183 3e-44 seq1612594 84.2 2e-14 seq972737 84.2 2e-14 seq292962 84.2 2e-14 seq1917190 78.8 9e-13 seq2523346 77.0 3e-12 seq633358 77.0 3e-12 seq2476118 75.2 1e-11 seq2537350 73.4 4e-11 seq2528398 73.4 4e-11 >seq1898082 Length=53401 Score = 183 bits (202), Expect = 3e-44 Identities = 134/156 (86%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83 ||||||||||||||||||||| ||||||||||||||||||| | |||||||||||| ||| Sbjct 29784 GTTGAGCGATGGCCCTTCCATACAGAACCACCGGATCACTAAGGCCTGCTTTCGCATCTG 29725 Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAACCTCACGATGTC 143 |||| | |||| ||| ||||||| | ||||||||| |||||||||||| ||||| || Sbjct 29724 CTCGCGTTATCACGCTCACAGTCAAACTGGCTTATGCCTTTGCACTAACCTTACGATTTC 29665 Query 144 CGACCGTGATTAGCTGACCTTCGTGCTCCTCCGTTA 179 | ||||| |||||| | ||||| |||||||||||| Sbjct 29664 CAACCGTAATTAGCCAATCTTCGCGCTCCTCCGTTA 29629 >seq1612594 Length=833 Score = 84.2 bits (92), Expect = 2e-14 Identities = 82/106 (77%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83 |||||||||||||||||||| || | ||| |||||||||| | || ||||| |||| Sbjct 215 GTTGAGCGATGGCCCTTCCACTCGGCACCGTCGGATCACTAAGGCCGAATTTCGTCCCTG 156 Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACT 129 ||||| || ||| |||||||||| ||| |||| ||||||| Sbjct 155 CTCGACGGGTGGGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACT 110 >seq972737 Length=1376 Score = 84.2 bits (92), Expect = 2e-14 Identities = 94/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 25 TTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTGC 84 ||||||||||||||||||| || | ||| |||||||||| | || ||||| ||||| Sbjct 104 TTGAGCGATGGCCCTTCCACTCGGCACCGTCGGATCACTAAGGCCAACTTTCATCCCTGC 163 Query 85 TCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAACCTCACGATGTCC 144 |||| || ||| |||||||||| ||| |||| ||||||| | |||| ||| Sbjct 164 TCGACGGGTGGGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACTCAAGGACCGATTTCC 223 Query 145 GACCGT 150 | |||| Sbjct 224 GTCCGT 229 >seq292962 Length=605 Score = 84.2 bits (92), Expect = 2e-14 Identities = 82/106 (77%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83 |||||||||||||||||||| || | ||| |||||||||| | | |||||| |||| Sbjct 255 GTTGAGCGATGGCCCTTCCACTCGGCACCGTCGGATCACTAAGGTCGACTTTCGTCCCTG 196 Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACT 129 |||| || ||| |||||||||| |||||||| ||||||| Sbjct 195 ATCGACTGGTGGGTCTTGCAGTCAAGCTCCCTTATGCCTTTGCACT 150 >seq1917190 Length=87042 Score = 78.8 bits (86), Expect = 9e-13 Identities = 81/106 (76%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83 ||||||||| ||||||||| ||| || ||||||||||||| || |||||| ||| Sbjct 70254 GTTGAGCGAAAGCCCTTCCACGCAGGACTCCCGGATCACTATGGCCGACTTTCGTCTCTG 70313 Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACT 129 |||| | || | |||| |||||| || ||||| ||||| |||| Sbjct 70314 TTCGACCGGTGAGTCTCACAGTCAGGCAGGCTTAGACCATTACACT 70359 >seq2523346 Length=22028 Score = 77.0 bits (84), Expect = 3e-12 Identities = 80/105 (76%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 25 TTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTGC 84 ||||| ||||||||||||| |||| ||| |||||||||| | |||||| ||||| Sbjct 2779 TTGAGTGATGGCCCTTCCACTCAGCACCGTCGGATCACTAAGGATGACTTTCGTCCCTGC 2838 Query 85 TCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACT 129 |||| || ||| |||||||||| ||| |||| ||||||| Sbjct 2839 TCGATGGGTGGGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACT 2883 >seq633358 Length=1395 Score = 77.0 bits (84), Expect = 3e-12 Identities = 80/105 (76%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 25 TTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTGC 84 ||||||||||||||||||| || | |||| |||||||||| | || ||||| ||| | Sbjct 1175 TTGAGCGATGGCCCTTCCACTCGGCACCATCGGATCACTAAGGCCGACTTTCATCCCTAC 1234 Query 85 TCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACT 129 |||| || ||| |||||||||| ||| | || ||||||| Sbjct 1235 TCGACGGGTGGGTCTTGCAGTCAAGCTCCCTTCTTCCTTTGCACT 1279 >seq2476118 Length=328616 Score = 75.2 bits (82), Expect = 1e-11 Identities = 80/106 (75%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83 |||||||||||||||||||| |||| |||| | ||||||| | | ||||| ||| Sbjct 206420 GTTGAGCGATGGCCCTTCCACTCAGCACCATCATATCACTAAGTCTAACTTTCATCCCTA 206361 Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACT 129 ||||| || ||| ||||||||||| ||| | || ||||||| Sbjct 206360 CTCGATGGGTGGGTCTTGCAGTCAAGCCCCCTTCTACCTTTGCACT 206315 >seq2537350 Length=37794 Score = 73.4 bits (80), Expect = 4e-11 Identities = 79/105 (75%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 25 TTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTGC 84 ||||||||||||||||||| || | || | || ||||||| | | ||||| ||||| Sbjct 12061 TTGAGCGATGGCCCTTCCACTCGGCACTATCGAATCACTAAGGCTGACTTTCATCCCTGC 12120 Query 85 TCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACT 129 |||| || ||| |||||||||| ||| |||| ||||||| Sbjct 12121 TCGACGGGTGGGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACT 12165 >seq2528398 Length=7677 Score = 73.4 bits (80), Expect = 4e-11 Identities = 79/105 (75%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 25 TTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTGC 84 ||||| ||||||||||||| || | |||| |||||||||| | || ||||| ||||| Sbjct 1666 TTGAGAGATGGCCCTTCCACTCGGCACCATCGGATCACTAAGGCCGACTTTCATCCCTGC 1607 Query 85 TCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACT 129 |||| || ||| ||||||||| ||| | || ||||||| Sbjct 1606 TCGATGGGTGGGTCTTGCAGTCAAGATCCCTTCTACCTTTGCACT 1562 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 459683118664