Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20glauca_20[genbank_20GCA_5F000411955.5_202016-01-12] 3,033,322 sequences; 24,633,077,211 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq933519 105 5e-18 seq1522372 102 6e-17 seq1033036 91.5 1e-13 seq2416635 87.8 1e-12 seq2365482 87.8 1e-12 seq2242544 87.8 1e-12 seq2912336 86.0 5e-12 seq1924330 86.0 5e-12 seq2981091 82.4 6e-11 seq2723061 82.4 6e-11 >seq933519 Length=1040 Score = 105 bits (116), Expect = 5e-18 Identities = 161/228 (71%), Gaps = 1/228 (0%) Strand=Plus/Plus Query 66340 CATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAAT 66399 |||||| || || |||| ||| || || | || ||||| | ||| | | || || | Sbjct 802 CATAAAGAGTTCTGGTACCCAAAGCGCAAAAAACAGATCACATGCCCTGTTTTCTTCCTT 861 Query 66400 GCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTA 66459 || || || || | ||| || || |||||||| | || ||||||||||| | | ||| Sbjct 862 CCCATGGTTCTTCCTCAACTCCAGAAACTCAAACAA-TCTGCATGCCATGGATATAAGTA 920 Query 66460 GATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTT 66519 ||||| || || ||| | | ||||| |||||||| || || || ||||| | || || Sbjct 921 CATGGCAAAGGAACCCTTCCTCTTGCCTCCACCTTGATCAACATATCGAGCAATATCATT 980 Query 66520 GAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCC 66567 ||| || | |||||| || || | || || ||| ||||||| || || Sbjct 981 GAATACCCTCAACATTGGCACAATACCATTGGATGTGCCATTTGTTCC 1028 >seq1522372 Length=1257 Score = 102 bits (112), Expect = 6e-17 Identities = 160/228 (70%), Gaps = 1/228 (0%) Strand=Plus/Plus Query 66340 CATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAAT 66399 |||||| || || || | ||| || || | || ||||| | ||| | | || || | Sbjct 304 CATAAAGAGTTCTGGCACCCAAAGCGCAAAAAACAGATCACATGCCCTGTTTTCTTCCTT 363 Query 66400 GCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTA 66459 || || || || | ||| || || |||||||| | || ||||||||||| || | ||| Sbjct 364 CCCATGGTTCTTCCTCAACTCCAGAAACTCAAAAAA-TCTGCATGCCATGGATCTAAGTA 422 Query 66460 GATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTT 66519 ||||| || || ||| | | |||||||| ||||| || || || ||||| || || Sbjct 423 CATGGCAAAGGAACCCTTCCTCTTGCCGCCGCCTTGATCAACATATCGAGCAGTATCATT 482 Query 66520 GAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCC 66567 ||| || | |||||| || || | || || ||| ||||||| || || Sbjct 483 GAATACCCTCAACATTGGCACAATACCATTGGATGTGCCATTTGTTCC 530 >seq1033036 Length=1205 Score = 91.5 bits (100), Expect = 1e-13 Identities = 121/167 (72%), Gaps = 1/167 (1%) Strand=Plus/Plus Query 66401 CCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAG 66460 || || || || | ||| || || |||||||| | || ||||||||||| || | ||| Sbjct 876 CCATGGTTCTTCCTCAACTCCAGAAACTCAAAAAA-TCTGCATGCCATGGATCTAAGTAC 934 Query 66461 ATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTG 66520 ||||| || || ||| | | ||||| |||||||| || || || ||||| || ||| Sbjct 935 ATGGCAAAGGAACCCTTCCTCTTGCCTCCACCTTGATCCACATATCGAGCAGTATCATTG 994 Query 66521 AAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCC 66567 || || | |||||| || || | || || ||| ||||||| || || Sbjct 995 AATACCCTCAACATTGGCACAATACCATTGGATGTGCCATTTGTTCC 1041 >seq2416635 Length=260445 Score = 87.8 bits (96), Expect = 1e-12 Identities = 157/228 (69%), Gaps = 1/228 (0%) Strand=Plus/Plus Query 66340 CATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAAT 66399 |||||| || || || | ||| || || | || ||||| | ||| | | || || | Sbjct 258535 CATAAAGAGTTCTGGCACCCAAAGCGCAAAAAACAGATCACATGCCCTATTTTCTTCCTT 258594 Query 66400 GCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTA 66459 || || || || | ||| || || |||||||| | || ||||||||||| || | ||| Sbjct 258595 CCCATGGTTCTTCCTCAACTCCAGAAACTCAAAAAA-TCTGCATGCCATGGATCTAAGTA 258653 Query 66460 GATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTT 66519 ||||| || | || | | ||||| ||||||||||| || || ||||| || || Sbjct 258654 CATGGCAAAGGCAGCCTTCCTCTTGCCTCCACCTTGGTCAACATATCGAGCAGTATCATT 258713 Query 66520 GAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCC 66567 ||| || | |||||| | || | || || ||| | ||||| || || Sbjct 258714 GAATACCCTCAACATTGTCACAATACCATTGGATGTCCCATTTGTTCC 258761 >seq2365482 Length=15309 Score = 87.8 bits (96), Expect = 1e-12 Identities = 157/228 (69%), Gaps = 1/228 (0%) Strand=Plus/Minus Query 66340 CATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAAT 66399 |||||| || || || | ||| || || | || ||||| | ||| | | || || | Sbjct 512 CATAAAGAGTTCTGGCACCCAAAGTGCAAAAAATAGATCACATGCCCTGTTTTCTTCCTT 453 Query 66400 GCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTA 66459 || || || || | ||| || || |||||||| | || ||||||||||| || | ||| Sbjct 452 CCCATGGTTCTTCCTCAACTCTAGAAACTCAAAAAA-TCTGCATGCCATGGATCTAAGTA 394 Query 66460 GATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTT 66519 ||||| || | ||| | | ||||| ||||| || || || || |||| || || Sbjct 393 CATGGCAAAGGCACCCTTCCTCTTGCCTCCACCGTGATCAACATATTGAGCAGTATCATT 334 Query 66520 GAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCC 66567 ||| || | |||||| || || | || || ||| ||||||| || || Sbjct 333 GAATACCCTCAACATTGGCACAATACCATTGGATGTGCCATTTGTTCC 286 >seq2242544 Length=4788 Score = 87.8 bits (96), Expect = 1e-12 Identities = 157/228 (69%), Gaps = 1/228 (0%) Strand=Plus/Minus Query 66340 CATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAAT 66399 |||||| || || || | ||| || || | || ||||| | ||| | | || || | Sbjct 2287 CATAAAGAGTTCTGGCACCCAAAGCGCAAAAAACAGATCACATGCCCTATTTTCTTCCTT 2228 Query 66400 GCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTA 66459 || || || || | ||| || || |||||||| | || ||||||||||| || | || Sbjct 2227 CCCATGGTTCTTCCTCAACTCCAGAAACTCAAAAAA-TCTGCATGCCATGGATCTAATTA 2169 Query 66460 GATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTT 66519 |||| || | ||| ||| || || |||||||| || || || ||||| || || Sbjct 2168 CATGGAAAAGGCACCCTTACTCTTTCCTCCACCTTGATCAACATATCGAGCAGTATCATT 2109 Query 66520 GAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCC 66567 ||| || | |||||| || || | || || ||| ||||||| || || Sbjct 2108 GAATACCCTCAACATTGGCACAATACCATTGGATGTGCCATTTGTTCC 2061 >seq2912336 Length=5714 Score = 86.0 bits (94), Expect = 5e-12 Identities = 76/95 (80%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 61543 GCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTG 61602 |||||||||||||||||||| | || |||||||| ||||| || ||| ||||||| | Sbjct 4893 GCAATCTTTTGGTTGAAGAAGAGGGGGCTTATGCCTGGTCTAACTTTCTCCAATGAGCTT 4834 Query 61603 ATATCACGCGACGAGGGCATGCATTGTGATTTTGC 61637 || ||| | || || ||| | |||||||| ||||| Sbjct 4833 ATTTCAAGGGATGAAGGCCTCCATTGTGACTTTGC 4799 >seq1924330 Length=16920 Score = 86.0 bits (94), Expect = 5e-12 Identities = 76/95 (80%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 61543 GCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTG 61602 |||||||||||||||||||| | || |||||||| ||||| || ||| ||||||| | Sbjct 12129 GCAATCTTTTGGTTGAAGAAGAGGGGGCTTATGCCTGGTCTAACTTTCTCCAATGAGCTT 12188 Query 61603 ATATCACGCGACGAGGGCATGCATTGTGATTTTGC 61637 || ||| | || || ||| | |||||||| ||||| Sbjct 12189 ATTTCAAGGGATGAAGGCCTCCATTGTGACTTTGC 12223 Score = 86.0 bits (94), Expect = 5e-12 Identities = 76/95 (80%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 61543 GCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTG 61602 |||||||||||||||||||| | || |||||||| ||||| || ||| ||||||| | Sbjct 15280 GCAATCTTTTGGTTGAAGAAGAGGGGGCTTATGCCTGGTCTAACTTTCTCCAATGAGCTT 15339 Query 61603 ATATCACGCGACGAGGGCATGCATTGTGATTTTGC 61637 || ||| | || || ||| | |||||||| ||||| Sbjct 15340 ATTTCAAGGGATGAAGGCCTCCATTGTGACTTTGC 15374 >seq2981091 Length=351938 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 66340 CATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAAT 66399 ||| || || || || | ||| || || | || ||||| ||||| | || || | Sbjct 339050 CATTAAGAGGTCTGGCACCCAAAGTGCAAAAAACAGATCACGTGCCATGTTTTCTTCCTT 339109 Query 66400 GCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTA 66459 | || || || | ||| || || |||||||| | || ||||||||||| || | ||| Sbjct 339110 CCTATGGTTCTTCCCCAACTCCAGAAACTCAAAAACATCTGCATGCCATGGCTCTAAGTA 339169 Query 66460 GATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTT 66519 |||| || | ||| | | ||||| |||||||| || || || |||| || || Sbjct 339170 CATGGAAAAGGCACCCTTCCTCTTGCCTCCACCTTGATCAACATATCGAGAAGAATCATT 339229 Query 66520 GAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCC 66567 ||| || | |||||| || || | || || ||| ||||||| || || Sbjct 339230 GAATACCCTCAACATTGGCACAATACCATTGGATGTGCCATTTGTTCC 339277 >seq2723061 Length=1725 Score = 82.4 bits (90), Expect = 6e-11 Identities = 152/222 (68%), Gaps = 1/222 (0%) Strand=Plus/Plus Query 66340 CATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAAT 66399 |||||| || | || | ||| || || | || ||||| | ||| | | || || | Sbjct 84 CATAAAGAGTTATGGCACCCAAAGCGCAAAAAACAGATCACATGCCCTGTTTTCTTCCTT 143 Query 66400 GCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTA 66459 || || || || | ||| || || |||||||| | || ||||||||||| || | ||| Sbjct 144 CCCATGGTTCTTCCTCAACTCCAGAAACTCAAAAAA-TCTGCATGCCATGGATCTAAGTA 202 Query 66460 GATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTT 66519 |||| || ||| | | ||||| |||||||| || || || ||||| || || Sbjct 203 CTTGGCAAAGACACCCTTCCTCTTGCCTCCACCTTGATCAACATATCGAGCAGTATCATT 262 Query 66520 GAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATT 66561 ||| || | |||||| || || | || || ||| ||||||| Sbjct 263 GAATACCCTCAACATTGGCACAATACCATTGGATGTGCCATT 304 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 382870462914080