Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pinus_20lambertiana_20[genbank_20GCA_5F001447015.2_202015-11-17]
4,253,097 sequences; 27,602,653,187 total letters
Query= AAMG01000370.1
Length=180
Score E
Sequences producing significant alignments: (Bits) Value
seq1525014 87.8 2e-15
seq1351855 75.2 1e-11
>seq1525014
Length=201
Score = 87.8 bits (96), Expect = 2e-15
Identities = 126/175 (72%), Gaps = 2/175 (1%)
Strand=Plus/Plus
Query 6 ACGGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACG 65
||||||||| ||||||| | | ||| ||| ||||| |||| ||||| ||||| ||| ||
Sbjct 16 ACGGTGGATACCTAGGCACCCAGAGACGAGGAAGGGCGTGGTAAGCGACGAAATGCTTCG 75
Query 66 GGGATTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCCGATATATTGGA 125
|||| | | | || | || ||||||||||| |||||| || ||||| | | ||
Sbjct 76 GGGAGTTGAAAATGAGCATAGATCCGTAGATTCCCGAATAGGTTAACCCTTTTAACTGCT 135
Query 126 GATATATCATAACGCTAGGCGTTAGGCGAACGTGGGGAACTGAAACATCTAAGTA 180
| | ||| | | |||| || | ||| ||| |||||||||||||| ||||
Sbjct 136 GCTGAATC-CATGGGCAGGCAAGAGAC-AACCTGGCGAACTGAAACATCTTAGTA 188
>seq1351855
Length=200
Score = 75.2 bits (82), Expect = 1e-11
Identities = 117/165 (71%), Gaps = 2/165 (1%)
Strand=Plus/Plus
Query 16 CCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACGGGGATTGGCA 75
||||||| | | ||| ||| ||||| |||| ||||| ||||| ||| |||||| | | |
Sbjct 1 CCTAGGCACCCAGAGACGAGGAAGGGCGTGGTAAGCGACGAAATGCTTCGGGGAGTTGAA 60
Query 76 CATACGAATTGATCCGTAGATATCCGAATGGGGCAACCCGATATATTGGAGATATATCAT 135
|| | || |||||| |||| |||||| || ||||| || | || | | |||
Sbjct 61 AATGAGCATAGATCCGGAGATTCCCGAATAGGTTAACCCTATTAACTGCTGCTGAATCCA 120
Query 136 AACGCTAGGCGTTAGGCGAACGTGGGGAACTGAAACATCTAAGTA 180
|| |||| || | ||| ||| |||||||||||||| ||||
Sbjct 121 TGGGC-AGGCAAGAGAC-AACCTGGCGAACTGAAACATCTTAGTA 163
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 457154944957
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |