Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pinus_20taeda_20[genbank_20GCA_5F000404065.3_202017-01-09]
1,760,464 sequences; 22,103,635,615 total letters
Query= AAMG01001851.1
Length=140
Score E
Sequences producing significant alignments: (Bits) Value
seq1468641 82.4 5e-14
seq1188842 82.4 5e-14
seq36719 73.4 3e-11
>seq1468641
Length=444
Score = 82.4 bits (90), Expect = 5e-14
Identities = 86/113 (76%), Gaps = 0/113 (0%)
Strand=Plus/Minus
Query 6 TTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTGCTTTC 65
|||||||||||||||| | |||||||| ||| || |||||||||| | || |||||
Sbjct 145 TTTATCCGTTGAGCGACGACCCTTCCACTCAGCACCGTCGGATCACTAAGTCCGACTTTC 86
Query 66 GCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT 118
| |||||| | || | ||| ||| |||||| | ||| |||| |||||||
Sbjct 85 GTCCCTGCTCGATGGGTGGGTCTTGCAGTCAAGCTCTCTTCTGCCTTTGCACT 33
>seq1188842
Length=604
Score = 82.4 bits (90), Expect = 5e-14
Identities = 86/113 (76%), Gaps = 0/113 (0%)
Strand=Plus/Minus
Query 6 TTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTGCTTTC 65
|||||||||||||||| | |||||||| ||| || |||||||||| | || |||||
Sbjct 142 TTTATCCGTTGAGCGACGACCCTTCCACTCAGCACCGTCGGATCACTAAGTCCGACTTTC 83
Query 66 GCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT 118
| |||||| | || | ||| ||| |||||| | ||| |||| |||||||
Sbjct 82 GTCCCTGCTCGATGGGTGGGTCTTGCAGTCAAGCTCTCTTCTGCCTTTGCACT 30
>seq36719
Length=373023
Score = 73.4 bits (80), Expect = 3e-11
Identities = 87/118 (74%), Gaps = 0/118 (0%)
Strand=Plus/Plus
Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60
|| |||||||| ||||||||| |||||||| || ||| |||||||||| | ||
Sbjct 207997 TAACTTTTATCGGTTGAGCGACAACCCTTCCACTCGGCACCATCGGATCACTAAGGCCAA 208056
Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT 118
|||||| || ||| | || | ||| || |||||| | ||| ||||||||||||
Sbjct 208057 CTTTCGTCCCTACTCGATGGGTGGGTCTTACAGTCAAGCTCTCTTCTGCCATTGCACT 208114
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 346190468800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |