Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pinus_20taeda_20[genbank_20GCA_5F000404065.3_202017-01-09] 1,760,464 sequences; 22,103,635,615 total letters Query= NC_014597.1 Length=1379 Score E Sequences producing significant alignments: (Bits) Value seq798406 91.5 1e-15 >seq798406 Length=249124 Score = 91.5 bits (100), Expect = 1e-15 Identities = 148/208 (71%), Gaps = 14/208 (7%) Strand=Plus/Plus Query 755 AATAATATTGTATTTGATATTCCTCGTGATAAGAAGGATTATTTACAATATAGTTTAATA 814 || ||| ||||||||||||||||||||||||| |||| ||| | || || | |||| Sbjct 130116 AACAATGTTGTATTTGATATTCCTCGTGATAAACAGGAATATCTTCAGTACTCTGTAATC 130175 Query 815 GAGATGTTTAAGGATAGGTTAATAGTT-AGTA--ATAAGTACGAGCCTCTTA-TGGCC-- 868 |||| | | || || || ||| || ||| |||| || || || ||| ||| Sbjct 130176 GAGAAGATGAAAGACAG---AATTGTGCAGTCTGATAAATATGAACCAGTTACTGGTTTT 130232 Query 869 -CCATTAATTAATTGTATTCATGTTGTAGTTATGTCTAATTTTCTCCCTGATTTTGAGAA 927 | || ||| || ||||||||||| |||||||||||||| | ||||||| |||||| Sbjct 130233 GCTATGAATAAA----ATTCATGTTGTTGTTATGTCTAATTTCTTGCCTGATTATGAGAA 130288 Query 928 GATTAGTAATGATAGGGTTCATGTAATT 955 ||| | || |||| || |||| || Sbjct 130289 AATTCGCCATCATAGCATTATTGTACTT 130316 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4223493981280