Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pinus_20taeda_20[genbank_20GCA_5F000404065.3_202017-01-09] 1,760,464 sequences; 22,103,635,615 total letters Query= NC_023880.1 Length=995 Score E Sequences producing significant alignments: (Bits) Value seq798406 75.2 7e-11 >seq798406 Length=249124 Score = 75.2 bits (82), Expect = 7e-11 Identities = 121/172 (70%), Gaps = 4/172 (2%) Strand=Plus/Plus Query 705 GTGGTATTTGATATTCCACGTGATATGAAGGATTATTGTAATTATAGTTTAATTGAAATG 764 || |||||||||||||| ||||||| |||| ||| | | || | |||| || | | Sbjct 130122 GTTGTATTTGATATTCCTCGTGATAAACAGGAATATCTTCAGTACTCTGTAATCGAGAAG 130181 Query 765 CTTAAGGATAGAATTATTATTAGCAATAAGTACGAACCAGTTAC--AAATTGCCAACTGT 822 | || || |||||| | |||| || ||||||||||| |||| | || Sbjct 130182 ATGAAAGACAGAATTGTGCAGTCTGATAAATATGAACCAGTTACTGGTTTTGCTA--TGA 130239 Query 823 CTAATATTCATGTAATTGTTATGGCTAATTTTTTGCCAGATTATTGTAAAAT 874 ||| |||||||| |||||||| ||||||| ||||| |||||| ||||| Sbjct 130240 ATAAAATTCATGTTGTTGTTATGTCTAATTTCTTGCCTGATTATGAGAAAAT 130291 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3022512309856