Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudotsuga_20menziesii_20[genbank_20GCA_5F001517045.1_202015-12-22] 1,236,665 sequences; 14,673,225,455 total letters Query= AAMG01000026.1 Length=199 Score E Sequences producing significant alignments: (Bits) Value seq570966 123 3e-26 >seq570966 Length=1489 Score = 123 bits (136), Expect = 3e-26 Identities = 147/198 (74%), Gaps = 1/198 (1%) Strand=Plus/Plus Query 1 GCAGTCTTTAGATGAATGGCTGCTTCCAGGCCAACATCCTAACTGTCTTATCAATCAGAC 60 ||| |||||| ||||||||||||||||| |||||||||||| ||||| || || || Sbjct 237 GCACTCTTTAAATGAATGGCTGCTTCCAAGCCAACATCCTAGCTGTCAATGCAGTCCAAC 296 Query 61 TTCGTTAGATTGACTTATCTGACATTTCTGGGGCATATCTGAGAGTCCGGATTCTTCTCC 120 |||| | ||||| | | |||| || | || ||| ||| || ||||| || Sbjct 297 CGCGTTGTTTCAACTTAGCATATATTTGGGGACCTTAGCTGTTGGTCTGGGTTCTTTCCC 356 Query 121 TCTCGGGCACGGACCTTACCACCCATGCCCTCACTCGCGCGGCATGACTGATGCGCATTC 180 |||||| || |||||||| |||||||||||||||| || | | | | || |||||| Sbjct 357 TCTCGGACATGGACCTTAGCACCCATGCCCTCACT-GCTGCGAAACATTTATTAGCATTC 415 Query 181 GGAGTTTGGCAGGACTTG 198 |||||||| ||||| ||| Sbjct 416 GGAGTTTGTCAGGAATTG 433 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531159448680