Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudotsuga_20menziesii_20[genbank_20GCA_5F001517045.1_202015-12-22]
1,236,665 sequences; 14,673,225,455 total letters
Query= AAMG01001690.1
Length=455
Score E
Sequences producing significant alignments: (Bits) Value
seq70662 214 5e-53
>seq70662
Length=310
Score = 214 bits (236), Expect = 5e-53
Identities = 198/251 (79%), Gaps = 0/251 (0%)
Strand=Plus/Plus
Query 3 ATCAGGAACACTTCACGGGCACCGGCGCCAAGGGCCGATTCACGGATGGCACGACGCTCC 62
||||| ||||||||||| || || ||||| | || |||||||| || || || || ||
Sbjct 54 ATCAGAAACACTTCACGCGCGCCTGCGCCCTGAGCAGATTCACGAATCGCGCGGCGTTCA 113
Query 63 ACCTGGGTGGACTTGCACGGAACGCAGATCAGCACACGAGGGCTGGGCTGCAGGAAACTG 122
||||| || | | | || ||||||| ||||||||| |||||||| ||| ||||||
Sbjct 114 ACCTGTGTTGCCCCGACGGGTACGCAGACCAGCACACGCGGGCTGGGACGCATAAAACTG 173
Query 123 TTTTCGTGAACCTTGTTGATGAAGTACTGCAGCATCTTCTCGCAGACGCTGAAGTCGGCG 182
|| |||||||| |||||||||| ||||||||||| ||| ||| |||||| |||
Sbjct 174 TTGCTGTGAACCTGCTTGATGAAGTGTTGCAGCATCTTTTCGGTCACGAAGAAGTCAGCG 233
Query 183 ATCACGCCGTCTTTCATCGGACGAATGGCAGCAATATTGCCTGGTGTACGGCCGAGCATG 242
|| ||||| ||||||||||||||||| || || ||||||||||| |||||||| |||||
Sbjct 234 ATAACGCCATCTTTCATCGGACGAATCGCTGCGATATTGCCTGGCGTACGGCCAAGCATC 293
Query 243 CGCTTGGCCTC 253
| ||||||||
Sbjct 294 TGTTTGGCCTC 304
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1336860502560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |