Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudotsuga_20menziesii_20[genbank_20GCA_5F001517045.1_202015-12-22] 1,236,665 sequences; 14,673,225,455 total letters Query= AAMG01001690.1 Length=455 Score E Sequences producing significant alignments: (Bits) Value seq70662 214 5e-53 >seq70662 Length=310 Score = 214 bits (236), Expect = 5e-53 Identities = 198/251 (79%), Gaps = 0/251 (0%) Strand=Plus/Plus Query 3 ATCAGGAACACTTCACGGGCACCGGCGCCAAGGGCCGATTCACGGATGGCACGACGCTCC 62 ||||| ||||||||||| || || ||||| | || |||||||| || || || || || Sbjct 54 ATCAGAAACACTTCACGCGCGCCTGCGCCCTGAGCAGATTCACGAATCGCGCGGCGTTCA 113 Query 63 ACCTGGGTGGACTTGCACGGAACGCAGATCAGCACACGAGGGCTGGGCTGCAGGAAACTG 122 ||||| || | | | || ||||||| ||||||||| |||||||| ||| |||||| Sbjct 114 ACCTGTGTTGCCCCGACGGGTACGCAGACCAGCACACGCGGGCTGGGACGCATAAAACTG 173 Query 123 TTTTCGTGAACCTTGTTGATGAAGTACTGCAGCATCTTCTCGCAGACGCTGAAGTCGGCG 182 || |||||||| |||||||||| ||||||||||| ||| ||| |||||| ||| Sbjct 174 TTGCTGTGAACCTGCTTGATGAAGTGTTGCAGCATCTTTTCGGTCACGAAGAAGTCAGCG 233 Query 183 ATCACGCCGTCTTTCATCGGACGAATGGCAGCAATATTGCCTGGTGTACGGCCGAGCATG 242 || ||||| ||||||||||||||||| || || ||||||||||| |||||||| ||||| Sbjct 234 ATAACGCCATCTTTCATCGGACGAATCGCTGCGATATTGCCTGGCGTACGGCCAAGCATC 293 Query 243 CGCTTGGCCTC 253 | |||||||| Sbjct 294 TGTTTGGCCTC 304 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1336860502560