Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudotsuga_20menziesii_20[genbank_20GCA_5F001517045.1_202015-12-22] 1,236,665 sequences; 14,673,225,455 total letters Query= NC_010356.1 Length=190032 Score E Sequences producing significant alignments: (Bits) Value seq131655 87.8 2e-12 >seq131655 Length=490359 Score = 87.8 bits (96), Expect = 2e-12 Identities = 107/143 (75%), Gaps = 5/143 (3%) Strand=Plus/Plus Query 115432 ATTAAAATTGGAATTTGAAAAAGTGTATATGCCCTATTTGTTAATTTGCAAGAAACGCTA 115491 |||||| | ||| ||||||||| | || || || ||||| ||| ||||| || || Sbjct 300215 ATTAAACTAGGA-TTTGAAAAAATATACTACCCATACTTGTTGATTAGCAAGGAAA--TA 300271 Query 115492 TATAGGTGCCCATTG--GACAAAGCCAGAGATGTATGATAAAATCGATACAAAAGGTGTT 115549 ||| | ||| |||| || ||||||||| | ||||| ||||| ||||| ||||| || Sbjct 300272 TATGCGGGCCTATTGTGGAGAAAGCCAGATGTATATGACAAAATGGATACTAAAGGAATT 300331 Query 115550 GAAACGGCTAGAAGGGACAATTG 115572 ||||| | ||||||||||||| Sbjct 300332 GAAACAGTACGAAGGGACAATTG 300354 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 598576141732800