Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Auxenochlorella_20protothecoides_20[refseq_20GCF_5F000733215.1_20201 4-08-01] 374 sequences; 22,924,637 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq363 286 5e-75 >seq363 Length=7842 Score = 286 bits (316), Expect = 5e-75 Identities = 207/236 (88%), Gaps = 4/236 (2%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||| |||| ||||||| |||||||||||| ||| | Sbjct 2954 GTACAAAGGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGCATT-C 2897 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120 ||||||||||| ||| ||||||||||||||||||||||||||||| || |||||| Sbjct 2896 CTCGTTGAAGATCAATAATTGCAATGATCTATCCCCATCACGATGCGGGTTGCGAGATTA 2837 Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180 ||||| |||||||||||||| | | |||||||| ||||| |||||||||||||||| Sbjct 2836 CCCGGGCCTGTCGGCCAAGGC--TGGGCTCGTTGACCGCATCATTGTAGCGCGCGTGCGG 2779 Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTA 236 |||||||||||||||||||||||||||||||||||||||||| ||||| | | ||| Sbjct 2778 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAGCTTCCCTCGGCTA 2723 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751997275410