Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Auxenochlorella_20protothecoides_20[refseq_20GCF_5F000733215.1_20201
4-08-01] 374 sequences; 22,924,637 total letters
Query= AAMG01000185.1
Length=266
Score E
Sequences producing significant alignments: (Bits) Value
seq363 286 5e-75
>seq363
Length=7842
Score = 286 bits (316), Expect = 5e-75
Identities = 207/236 (88%), Gaps = 4/236 (2%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| ||||||| |||| ||||||| |||||||||||| ||| |
Sbjct 2954 GTACAAAGGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGCATT-C 2897
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120
||||||||||| ||| ||||||||||||||||||||||||||||| || ||||||
Sbjct 2896 CTCGTTGAAGATCAATAATTGCAATGATCTATCCCCATCACGATGCGGGTTGCGAGATTA 2837
Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180
||||| |||||||||||||| | | |||||||| ||||| ||||||||||||||||
Sbjct 2836 CCCGGGCCTGTCGGCCAAGGC--TGGGCTCGTTGACCGCATCATTGTAGCGCGCGTGCGG 2779
Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTA 236
|||||||||||||||||||||||||||||||||||||||||| ||||| | | |||
Sbjct 2778 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAGCTTCCCTCGGCTA 2723
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 751997275410
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |