Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Auxenochlorella_20protothecoides_20[refseq_20GCF_5F000733215.1_20201
4-08-01] 374 sequences; 22,924,637 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq363 242 7e-62
>seq363
Length=7842
Score = 242 bits (268), Expect = 7e-62
Identities = 204/245 (83%), Gaps = 4/245 (2%)
Strand=Plus/Plus
Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCATGGA 133
||||||||| ||||||||||||||||||||||| | |||| |||||||||||||||||
Sbjct 2063 TTACTTTGAGTAAATTAGAGTGTTCAAAGCAGGCATCCGCTCTGAATACATTAGCATGGA 2122
Query 134 ATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAA 193
|||| | ||||||| | || | ||| |||||| | || ||||| ||||||||| |
Sbjct 2123 ATAACATGATAGGAC-TCTGGCT-TATCACGTTGGTCTGTAAGACCGGAGTAATGATTGA 2180
Query 194 TAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGA 253
||||| ||||||||| | ||||| ||||||||||||||||||||||||||||| |
Sbjct 2181 GAGGGACAGTCGGGGGCATTCGTATTTCATTGTCAGAGGTGAAATTCTTGGATTTATGAA 2240
Query 254 AGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTT 313
|||| ||||||||||||||| || ||||||||||||||||| |||| |||||||||||
Sbjct 2241 AGACGAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTGATCA-AGAACGAAAGTT 2299
Query 314 AGGGG 318
||||
Sbjct 2300 GGGGG 2304
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 915196577152
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |