Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Auxenochlorella_20protothecoides_20[refseq_20GCF_5F000733215.1_20201 4-08-01] 374 sequences; 22,924,637 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq363 242 7e-62 >seq363 Length=7842 Score = 242 bits (268), Expect = 7e-62 Identities = 204/245 (83%), Gaps = 4/245 (2%) Strand=Plus/Plus Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCATGGA 133 ||||||||| ||||||||||||||||||||||| | |||| ||||||||||||||||| Sbjct 2063 TTACTTTGAGTAAATTAGAGTGTTCAAAGCAGGCATCCGCTCTGAATACATTAGCATGGA 2122 Query 134 ATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAA 193 |||| | ||||||| | || | ||| |||||| | || ||||| ||||||||| | Sbjct 2123 ATAACATGATAGGAC-TCTGGCT-TATCACGTTGGTCTGTAAGACCGGAGTAATGATTGA 2180 Query 194 TAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGA 253 ||||| ||||||||| | ||||| ||||||||||||||||||||||||||||| | Sbjct 2181 GAGGGACAGTCGGGGGCATTCGTATTTCATTGTCAGAGGTGAAATTCTTGGATTTATGAA 2240 Query 254 AGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTT 313 |||| ||||||||||||||| || ||||||||||||||||| |||| ||||||||||| Sbjct 2241 AGACGAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTGATCA-AGAACGAAAGTT 2299 Query 314 AGGGG 318 |||| Sbjct 2300 GGGGG 2304 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915196577152