Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Auxenochlorella_20protothecoides_20[refseq_20GCF_5F000733215.1_20201 4-08-01] 374 sequences; 22,924,637 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq363 259 8e-67 >seq363 Length=7842 Score = 259 bits (286), Expect = 8e-67 Identities = 216/265 (82%), Gaps = 12/265 (5%) Strand=Plus/Minus Query 3 CTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGAC 62 |||| || | | ||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 2811 CTCGTTGACCGCATCATTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGAC 2752 Query 63 CTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCA 122 ||||||||||||||| ||||| | |||| | ||| | ||||||||||||||| | | | Sbjct 2751 CTGTTATTGCCTCAAGCTTCCCTCGGCTAGTCGCCGAGAGTCCCTCTAAGAAGTTATCGA 2692 Query 123 CC---------AACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATC 173 |||| | | | |||||||||||| | ||||||||||||||| | Sbjct 2691 GGCTGGGGTGAAACCGCAACCAAAA---CTATTTAGCAGGCTGAGGTCTCGTTCGTTACC 2635 Query 174 GGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGA 233 ||||| |||| ||||| || |||||||||||||||||||||||||||||||||||||| Sbjct 2634 GGAATCAACCTGACAAGGCAACCCACCAACTAAGAACGGCCATGCACCACCACCCATAGA 2575 Query 234 ATCAAGAAAGAGCTATCAATCTGTC 258 |||||||||||||| |||||||||| Sbjct 2574 ATCAAGAAAGAGCTCTCAATCTGTC 2550 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796797113094