Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Auxenochlorella_20protothecoides_20[refseq_20GCF_5F000733215.1_20201 4-08-01] 374 sequences; 22,924,637 total letters Query= AAMG01001083.1 Length=339 Score E Sequences producing significant alignments: (Bits) Value seq260 179 7e-43 >seq260 Length=66046 Score = 179 bits (198), Expect = 7e-43 Identities = 176/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 113 GACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCGC 172 |||||| |||| |||||||||||||||||||||| ||| ||| ||||| ||| | Sbjct 26737 GACAGTTTCAGGTGGGCAGTTTGACTGGGGCGGTCATCTCTTAAAAGGTAACAGAGATGT 26796 Query 173 CCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGGTGTT 232 ||||| | || |||| |||| ||||| || || | ||| ||||||| ||||| | | Sbjct 26797 GCAAAGGTTCCTTCAGGCTGGACGGAAATCAGCCGTAGAGTATAAAGGCAGAAGGGAGCT 26856 Query 233 TGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTGC 292 |||||| | ||| |||||| | ||||| |||||| ||| |||| ||||||| |||| | Sbjct 26857 TGACTGTAAGACCTACAAGTCAAACAGGGGCGAAAGCCGGCCTTAGTGATCCGACGGTAC 26916 Query 293 TGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 || ||||| |||||||||| ||||||||||| ||| || |||||| Sbjct 26917 CGAGTGGAAGGGCCGTCGCTAAACGGATAAAAGTTACTCTAGGGATA 26963 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 982396325824