Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Auxenochlorella_20protothecoides_20[refseq_20GCF_5F000733215.1_20201
4-08-01] 374 sequences; 22,924,637 total letters
Query= AAMG01001083.1
Length=339
Score E
Sequences producing significant alignments: (Bits) Value
seq260 179 7e-43
>seq260
Length=66046
Score = 179 bits (198), Expect = 7e-43
Identities = 176/227 (78%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 113 GACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCGC 172
|||||| |||| |||||||||||||||||||||| ||| ||| ||||| ||| |
Sbjct 26737 GACAGTTTCAGGTGGGCAGTTTGACTGGGGCGGTCATCTCTTAAAAGGTAACAGAGATGT 26796
Query 173 CCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGGTGTT 232
||||| | || |||| |||| ||||| || || | ||| ||||||| ||||| | |
Sbjct 26797 GCAAAGGTTCCTTCAGGCTGGACGGAAATCAGCCGTAGAGTATAAAGGCAGAAGGGAGCT 26856
Query 233 TGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTGC 292
|||||| | ||| |||||| | ||||| |||||| ||| |||| ||||||| |||| |
Sbjct 26857 TGACTGTAAGACCTACAAGTCAAACAGGGGCGAAAGCCGGCCTTAGTGATCCGACGGTAC 26916
Query 293 TGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339
|| ||||| |||||||||| ||||||||||| ||| || ||||||
Sbjct 26917 CGAGTGGAAGGGCCGTCGCTAAACGGATAAAAGTTACTCTAGGGATA 26963
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 982396325824
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |