Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Auxenochlorella_20protothecoides_20[refseq_20GCF_5F000733215.1_20201
4-08-01] 374 sequences; 22,924,637 total letters
Query= AAMG01001752.1
Length=400
Score E
Sequences producing significant alignments: (Bits) Value
seq260 203 8e-50
seq336 93.3 1e-16
>seq260
Length=66046
Score = 203 bits (224), Expect = 8e-50
Identities = 163/193 (84%), Gaps = 3/193 (2%)
Strand=Plus/Minus
Query 207 CCACAGCTTCGGCGGATAACTTAAGCCCCGCTACATTATCGGCGCGGAATCACTTG-ACC 265
||||||||||||| ||||| ||||| |||| |||||| ||||||| || | || | |||
Sbjct 25653 CCACAGCTTCGGCAGATAA-TTAAGTCCCG-TACATTTTCGGCGCAAAAACGCTAGTACC 25596
Query 266 AGTGAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCT 325
|||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| |
Sbjct 25595 AGTGAGCTATTACGCACTCTTTAAAGGATGGCTGCTTCTAAGCCAACCTCCTGGTTGTGT 25536
Query 326 ACGCAACTCCACATCCTTTCCCACTGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGG 385
||| | ||| |||||| |||| | |||| || ||||||||||||| || |||||
Sbjct 25535 TTGCATTTTCACCTCCTTTGTCACTACATTACCATTTTGGGGCCTTAGCTGGTGGTCTGG 25476
Query 386 GCTGTTTCCCTCT 398
|||||||||||||
Sbjct 25475 GCTGTTTCCCTCT 25463
>seq336
Length=57273
Score = 93.3 bits (102), Expect = 1e-16
Identities = 104/139 (75%), Gaps = 0/139 (0%)
Strand=Plus/Plus
Query 262 GACCAGTGAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTT 321
||||||||||||| ||||| || || | |||||||||||| ||||| || | ||||||
Sbjct 2202 GACCAGTGAGCTACTACGCTTTCATTATAAGATGGCTGCTTCTAAGCCTACTTGCTGGTT 2261
Query 322 GTCTACGCAACTCCACATCCTTTCCCACTGAGTCACCACTTAGGGGCCTTAGCTGATGAT 381
|||| || || |||||| ||||| | | | ||| || ||||||| |||
Sbjct 2262 GTCTGGGCTCAATAACCTCCTTTACCACTAAATATACGCTTTGGAACCTTAGCGTTCGAT 2321
Query 382 CTGGGCTGTTTCCCTCTCG 400
||||||||||||||| |||
Sbjct 2322 CTGGGCTGTTTCCCTTTCG 2340
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1177595595776
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |