Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Auxenochlorella_20protothecoides_20[refseq_20GCF_5F000733215.1_20201
4-08-01] 374 sequences; 22,924,637 total letters
Query= AAMG01001821.1
Length=161
Score E
Sequences producing significant alignments: (Bits) Value
seq260 104 2e-20
seq336 89.7 4e-16
>seq260
Length=66046
Score = 104 bits (114), Expect = 2e-20
Identities = 119/160 (74%), Gaps = 0/160 (0%)
Strand=Plus/Minus
Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61
|||||||||| || ||||||| ||| || ||| || | |||||| ||||||||
Sbjct 23902 CGAGTTGCAGCCTGCAATCCGAACTGAGACCGGATTTTTGAGGTTAGCTTGTCCTCGCGG 23843
Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121
| | || | || ||| |||||||| ||||||| |||| ||||||| |||
Sbjct 23842 GGTCGCTTCTCTTTGTTCCGGCCATTGTAGCACGTGTGTCGCCCAGGATATAAGGGGCAT 23783
Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161
| ||||||||||||||| ||||||||||||| |||||||
Sbjct 23782 GCTGACTTGACGTCATCCTCACCTTCCTCCGGCTTGTCAC 23743
>seq336
Length=57273
Score = 89.7 bits (98), Expect = 4e-16
Identities = 114/156 (73%), Gaps = 1/156 (1%)
Strand=Plus/Minus
Query 1 TCGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCG 60
|||| ||||||| |||||| | |||| || | ||| | | ||| ||||| ||| |
Sbjct 50911 TCGAATTGCAGAAAACAATCTGTACTAAGACGAATTTTATAG-ATTTGCTCCGACTCTCA 50853
Query 61 GGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCA 120
| || | | ||||| |||||||| || ||| ||||| |||||||||| ||
Sbjct 50852 TCATTGCATCTTTTTGTATTCGCCATTGTAACACACGTGTAGCCCAGCCCATAAGGGTCA 50793
Query 121 TGAGGACTTGACGTCATCCCCACCTTCCTCCGGTTT 156
|||||||||||||| ||||| ||||||||| ||||
Sbjct 50792 TGAGGACTTGACGTAATCCCTTCCTTCCTCCAGTTT 50757
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 415998492780
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |