Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Auxenochlorella_20protothecoides_20[refseq_20GCF_5F000733215.1_20201 4-08-01] 374 sequences; 22,924,637 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq363 136 4e-30 >seq363 Length=7842 Score = 136 bits (150), Expect = 4e-30 Identities = 140/178 (79%), Gaps = 4/178 (2%) Strand=Plus/Plus Query 14 TTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCATGGA 72 ||||||||| ||||||||| ||||||||||||| | |||| |||||||||| |||||| Sbjct 2063 TTACTTTGAGTAAATTAGAGTGTTCAAAGCAGGCATCCGCTCTGAATACATTAGCATGGA 2122 Query 73 ATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAA 132 |||| | ||||||| | || | ||| || ||| | || ||||| |||||||| Sbjct 2123 ATAACATGATAGGAC-TCTGGCT-TATCACGTTGGTCTGTAAGACCGGA-GTAATGATTG 2179 Query 133 ATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTAT 190 | | ||| ||||||||| | ||||| ||||||| ||||||||||||||||||||| Sbjct 2180 AGAGGGACAGTCGGGGGCATTCGTATTTCATTGTCAGAGGTGAAATTCTTGGATTTAT 2237 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511998144960