Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Auxenochlorella_20protothecoides_20[refseq_20GCF_5F000733215.1_20201 4-08-01] 374 sequences; 22,924,637 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq363 293 4e-77 >seq363 Length=7842 Score = 293 bits (324), Expect = 4e-77 Identities = 222/258 (86%), Gaps = 4/258 (2%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 ||||||||||||||| ||||| | |||||| ||||| |||||||||||||||||||||| Sbjct 2699 CTTCTTAGAGGGACTCTCGGCGACTAGCCGAGGGAAGCTTGAGGCAATAACAGGTCTGTG 2758 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||||||||||||||||||||||||| ||| | ||||||| || | Sbjct 2759 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACAATGATGCGGTCAACGAGCCCAGC- 2817 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 |||||||| ||| | ||||||||| | | | | ||||| |||||||||| ||||| Sbjct 2818 -CTTGGCCGACAGGCCCGGGTAATCTCGCAACCCGCA-TCGTGATGGGGATAGATCATTG 2875 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 ||||||||| |||||||||||||||||||||||||||| ||||||||| ||||||||| Sbjct 2876 CAATTATTGATCTTCAACGAGGAATGCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATT 2935 Query 311 ACGTCCCTGCCCTTTGTA 328 |||||||||||||||||| Sbjct 2936 ACGTCCCTGCCCTTTGTA 2953 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947196457472