Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Auxenochlorella_20protothecoides_20[refseq_20GCF_5F000733215.1_20201 4-08-01] 374 sequences; 22,924,637 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq363 641 0.0 >seq363 Length=7842 Score = 641 bits (710), Expect = 0.0 Identities = 469/538 (87%), Gaps = 14/538 (3%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| |||||| |||||||| |||||| |||| | ||||||||||||||||||| Sbjct 6546 CTTTTGTTCTACACGAGATTTCCGTTCTCGTTGAGCTCATCTTAGGACACCTGCGTTATC 6487 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||||||||||||||||||||||||||||||||||||||| ||||| || ||| |||| Sbjct 6486 TTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACTATGTCTTCCACCTGGATG 6427 Query 127 GGCCCGCGA-AGGACC----TTAACGCCAGAAAATGGTCGGTGAAGA--CCAGT-TCCGC 178 || | | || ||| || | |||| | || | || | || || ||| Sbjct 6426 GGGGGGTGCGAGCACCCCCCTTGGATCGAGAAGAAGG---GAAAACAATCCCGTCTCCAA 6370 Query 179 TTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCG-CCGAAACGGC 237 |||| || ||||||||| |||| | | ||||||||||||||| ||| |||| | | Sbjct 6369 CTCATGGAATAAGTAAAATAACGTTGGGAGTAGTGGTATTTCACCGGCGTCCGAG--GAC 6312 Query 238 TCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAAC 297 |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct 6311 TCCCACTTATTCTACACCTCCCAAGTCATTTCACAAAGTCGGACTAGAGTCAAACTCAAC 6252 Query 298 AGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGA 357 |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct 6251 AGGGTCTTCTTTCCCCGCTGTTTCTTCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGA 6192 Query 358 TAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGA 417 |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct 6191 TAGTAGATAGGGACAGTGGGAATCTCATTGATCCATTCATGCGCGTCACTAATTAGATGA 6132 Query 418 CGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGT 477 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 6131 CGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGT 6072 Query 478 TGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATC 535 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 6071 TGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGTGTCAACATC 6014 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635193884352