Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Auxenochlorella_20protothecoides_20[refseq_20GCF_5F000733215.1_20201
4-08-01] 374 sequences; 22,924,637 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq363 641 0.0
>seq363
Length=7842
Score = 641 bits (710), Expect = 0.0
Identities = 469/538 (87%), Gaps = 14/538 (3%)
Strand=Plus/Minus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
|||||| |||||| |||||||| |||||| |||| | |||||||||||||||||||
Sbjct 6546 CTTTTGTTCTACACGAGATTTCCGTTCTCGTTGAGCTCATCTTAGGACACCTGCGTTATC 6487
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
|||||||||||||||||||||||||||||||||||||||| ||||| || ||| ||||
Sbjct 6486 TTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACTATGTCTTCCACCTGGATG 6427
Query 127 GGCCCGCGA-AGGACC----TTAACGCCAGAAAATGGTCGGTGAAGA--CCAGT-TCCGC 178
|| | | || ||| || | |||| | || | || | || || |||
Sbjct 6426 GGGGGGTGCGAGCACCCCCCTTGGATCGAGAAGAAGG---GAAAACAATCCCGTCTCCAA 6370
Query 179 TTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCG-CCGAAACGGC 237
|||| || ||||||||| |||| | | ||||||||||||||| ||| |||| | |
Sbjct 6369 CTCATGGAATAAGTAAAATAACGTTGGGAGTAGTGGTATTTCACCGGCGTCCGAG--GAC 6312
Query 238 TCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAAC 297
|||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||
Sbjct 6311 TCCCACTTATTCTACACCTCCCAAGTCATTTCACAAAGTCGGACTAGAGTCAAACTCAAC 6252
Query 298 AGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGA 357
|||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||
Sbjct 6251 AGGGTCTTCTTTCCCCGCTGTTTCTTCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGA 6192
Query 358 TAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGA 417
|||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||
Sbjct 6191 TAGTAGATAGGGACAGTGGGAATCTCATTGATCCATTCATGCGCGTCACTAATTAGATGA 6132
Query 418 CGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGT 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 6131 CGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGT 6072
Query 478 TGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATC 535
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 6071 TGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGTGTCAACATC 6014
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1635193884352
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |