Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Auxenochlorella_20protothecoides_20[refseq_20GCF_5F000733215.1_20201
4-08-01] 374 sequences; 22,924,637 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq363 563 3e-158
>seq363
Length=7842
Score = 563 bits (624), Expect = 3e-158
Identities = 438/511 (86%), Gaps = 12/511 (2%)
Strand=Plus/Minus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
||||||||||||||||| ||||| || |||| |||| ||||||||||||||||||
Sbjct 1809 GTACTCATTCCAATTACCAGACCTGTGAG-GCCCGGTATTGTTATTTATTGTCACTACCT 1751
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1750 CCCTGTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 1691
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180
|||||||||||||||||||||||||||||| || | |||| |||||| | ||| ||||
Sbjct 1690 TCTCAGGCTCCCTCTCCGGAATCGAACCCTGATCCTCCGTCACCCGTGAACACCTCGGTA 1631
Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240
|||| |||||||||| | ||||||||||||||||||||||||||||| |||||||||
Sbjct 1630 GGCCTCTATCCTACCGAC-AAAGTTGATAGGGCAGAAATTTGAATGAAACATCGCCGGTG 1572
Query 241 CA-AGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCC--CCGAAGGGCGTT 297
|| || ||||||||||||| ||||||| |||| ||||| ||| | ||| ||
Sbjct 1571 CAGAGACCATGCGATTCGTAAAGTTATCATGAGTCACC-GCGAGTCGGGCGAGCCCGGTC 1513
Query 298 GGTTTTTTATCTAATAAATACACCCCTT---CCGAAGTCGGGGTTTTTAGCATGTATTAG 354
|| || |||||||||||||||||||| || ||||||||| ||| ||| |||||||
Sbjct 1512 GGCCTTGGATCTAATAAATACACCCCTTCCACCAAAGTCGGGG-TTTGCGCAGGTATTAG 1454
Query 355 CTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATT 414
|||||||||||| |||| ||||| |||| |||||| ||||||||||| ||||||||||
Sbjct 1453 CTCTAGAATTACTACGGGTATCCCAGTAG-CAGGTACCATCAAATAAACTATAACTGATT 1395
Query 415 TAATGAGCCATTCGCAGTTTCACTGTA-TAGATTGCTTATACTTAGACATGCATGGCTTA 473
||||||||||||||||||||||| ||| || | | ||||||| ||||||||||||||||
Sbjct 1394 TAATGAGCCATTCGCAGTTTCACAGTAGTAAACAGGTTATACTCAGACATGCATGGCTTA 1335
Query 474 ATCTTTGAGACAAGCATATGACTACTGGCAG 504
|||||||||||||||||||||||||||||||
Sbjct 1334 ATCTTTGAGACAAGCATATGACTACTGGCAG 1304
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1510394351104
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |