Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Auxenochlorella_20protothecoides_20[refseq_20GCF_5F000733215.1_20201 4-08-01] 374 sequences; 22,924,637 total letters Query= NC_031927.1 Length=216121 Score E Sequences producing significant alignments: (Bits) Value seq336 84.2 3e-11 >seq336 Length=57273 Score = 84.2 bits (92), Expect = 3e-11 Identities = 64/76 (84%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 142790 TTCGGGGAATTAGCTCAGTTGGTAGAGCGCCTGCTTTGCAAGCAGGATGTCAACGGTTCG 142849 |||||||| ||| |||||||||||| ||| ||||||||| ||| || |||| ||||||| Sbjct 33619 TTCGGGGATGTAGTTCAGTTGGTAGAACGCATGCTTTGCACGCATGAAGTCATCGGTTCG 33678 Query 142850 AGTCCGTTATTCTCCA 142865 | |||||| |||||| Sbjct 33679 ACTCCGTTCATCTCCA 33694 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 691455967428240