Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Auxenochlorella_20protothecoides_20[refseq_20GCF_5F000733215.1_20201
4-08-01] 374 sequences; 22,924,637 total letters
Query= NC_031927.1
Length=216121
Score E
Sequences producing significant alignments: (Bits) Value
seq336 84.2 3e-11
>seq336
Length=57273
Score = 84.2 bits (92), Expect = 3e-11
Identities = 64/76 (84%), Gaps = 0/76 (0%)
Strand=Plus/Plus
Query 142790 TTCGGGGAATTAGCTCAGTTGGTAGAGCGCCTGCTTTGCAAGCAGGATGTCAACGGTTCG 142849
|||||||| ||| |||||||||||| ||| ||||||||| ||| || |||| |||||||
Sbjct 33619 TTCGGGGATGTAGTTCAGTTGGTAGAACGCATGCTTTGCACGCATGAAGTCATCGGTTCG 33678
Query 142850 AGTCCGTTATTCTCCA 142865
| |||||| ||||||
Sbjct 33679 ACTCCGTTCATCTCCA 33694
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 691455967428240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |