Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Auxenochlorella_20protothecoides_20[refseq_20GCF_5F000733215.1_20201 4-08-01] 374 sequences; 22,924,637 total letters Query= NC_032108.1 Length=589068 Score E Sequences producing significant alignments: (Bits) Value seq43 96.9 1e-14 >seq43 Length=247289 Score = 96.9 bits (106), Expect = 1e-14 Identities = 110/146 (75%), Gaps = 4/146 (3%) Strand=Plus/Plus Query 364423 ACCAATAGTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCAGGCACCATGCC 364482 ||| || ||||| || || || |||| | | ||||||||||| | ||| ||||| ||||| Sbjct 47740 ACCGATGGTCATGCGCGACGGGATGGCGTGCGGGTTGATGATCAGGTCGGGCACGATGCC 47799 Query 364483 GTCAGCGGTAAAGGGCATATCTTC--GGGAGGAACGATGAGACCAATGGTTCCCTTTTGC 364540 || ||||| |||||||| || || ||| | | | ||| || ||||| ||||| ||| Sbjct 47800 CTCCGCGGTGAAGGGCATGTCCTCCTGGGTGTA--GGTGATGCCGATGGTGCCCTTCTGC 47857 Query 364541 GCATAGCGAGAAGCAAACTTGTCGCC 364566 | | || |||||||| |||||||| Sbjct 47858 CCGTGCCGCGAAGCAAATTTGTCGCC 47883 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1884877367859982