Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Auxenochlorella_20protothecoides_20[refseq_20GCF_5F000733215.1_20201
4-08-01] 374 sequences; 22,924,637 total letters
Query= NC_032108.1
Length=589068
Score E
Sequences producing significant alignments: (Bits) Value
seq43 96.9 1e-14
>seq43
Length=247289
Score = 96.9 bits (106), Expect = 1e-14
Identities = 110/146 (75%), Gaps = 4/146 (3%)
Strand=Plus/Plus
Query 364423 ACCAATAGTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCAGGCACCATGCC 364482
||| || ||||| || || || |||| | | ||||||||||| | ||| ||||| |||||
Sbjct 47740 ACCGATGGTCATGCGCGACGGGATGGCGTGCGGGTTGATGATCAGGTCGGGCACGATGCC 47799
Query 364483 GTCAGCGGTAAAGGGCATATCTTC--GGGAGGAACGATGAGACCAATGGTTCCCTTTTGC 364540
|| ||||| |||||||| || || ||| | | | ||| || ||||| ||||| |||
Sbjct 47800 CTCCGCGGTGAAGGGCATGTCCTCCTGGGTGTA--GGTGATGCCGATGGTGCCCTTCTGC 47857
Query 364541 GCATAGCGAGAAGCAAACTTGTCGCC 364566
| | || |||||||| ||||||||
Sbjct 47858 CCGTGCCGCGAAGCAAATTTGTCGCC 47883
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1884877367859982
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |