Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Auxenochlorella_20pyrenoidosa_20[genbank_20GCA_5F001430745.1_202015-
11-03] 1,346 sequences; 56,992,954 total letters
Query= AAMG01000383.1
Length=435
Score E
Sequences producing significant alignments: (Bits) Value
seq1039 260 4e-67
seq1042 167 6e-39
>seq1039
Length=107091
Score = 260 bits (288), Expect = 4e-67
Identities = 304/408 (75%), Gaps = 2/408 (0%)
Strand=Plus/Plus
Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62
|| |||| ||||||||| ||||||||| ||||||||||||||||||| || ||| |||
Sbjct 79721 TATCTGAGGAATAAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAAGACAGAGGATGC 79780
Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGT 122
|||||||| |||||| | |||||||||||||| | ||| || | ||| | |||
Sbjct 79781 AAGCGTTATCCGGAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTAAAAAGTCTTCTGT 79840
Query 123 GAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGA 182
||| | |||||||||| || ||| | ||| | ||||||| || ||
Sbjct 79841 CAAAGATCAGGGCTTAACCCTGGGCCGGCAGGAGAAACTCTTAGGCTAGAGTTTGGTAGG 79900
Query 183 GGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGG 242
|| | |||||||| ||| ||| |||||||||||||| || ||||||||||||| ||
Sbjct 79901 GGCAGAGGGAATTCCCGGTGGAGCGGTGAAATGCGTAGAGATCGGGAGGAACACCAAAGG 79960
Query 243 CGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAG 302
|||| ||| | ||||| | |||||| || | ||||||||| |||||||||| |
Sbjct 79961 CGAAAGCACTCTGCTGGGCCACAACTGACACTGAGAGACGAAAGCGAGGGGAGCAAAAGG 80020
Query 303 GATTAGATACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTGTTGGGGA-TTTAC 361
|||||||||||| ||||||| |||| |||||||| ||||| |||||| | |||
Sbjct 80021 GATTAGATACCCCTGTAGTCCTCGCCGTAAACGATGGATACTAGATGTTGGATAGGTTAA 80080
Query 362 TTCCTT-GGTAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAATA 408
| || ||| ||||||||||||||||||| ||||||||||| ||
Sbjct 80081 AGCATTCAGTATCGTAGCTAACGCGTGAAGTATCCCGCCTGGGGAGTA 80128
>seq1042
Length=398099
Score = 167 bits (184), Expect = 6e-39
Identities = 234/327 (72%), Gaps = 1/327 (0%)
Strand=Plus/Plus
Query 12 AATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTAA 71
|| ||| ||||| || | |||||||||||||||||||||||| || ||||||||||
Sbjct 7902 AAAAAGTCCCGGCCAATTTCGTGCCAGCAGCCGCGGTAATACGAGAGGGGCAAGCGTTAT 7961
Query 72 TCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGTGAAATCCCC 131
||||||| | ||||||||||||| || |||| ||| | || || ||| | |
Sbjct 7962 TCGGAATGATTGGGCGTAAAGCGCACGTAGGCTGTTTAGAAAATCAAAAACAAAAAACTC 8021
Query 132 GGGCTTAACCTGGGA-ATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGAGGGGGGTG 190
|| || || | | ||| ||| | | ||| ||||| || ||||| | ||
Sbjct 8022 AAAGTTGTGCTTTGACACTTGTTTTCTGATTCCTAAACTTGAGTGAGTAAGAGGAGAATG 8081
Query 191 GAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGGCA 250
||||||| | |||| || |||| || ||||| ||||||||| ||| |||||||||
Sbjct 8082 GAATTCCTGGCGTAGAGGTAAAATTTGTTGATATCAGGAGGAACATCAAAAGCGAAGGCA 8141
Query 251 GCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGAT 310
| |||| | ||||||| | | | ||| |||||||||| |||| |||||||||
Sbjct 8142 ATTCTCTGGTACTCTACTGACGTTGAGGTGCGACAGCGTGGGGATCAAAAGGGATTAGAT 8201
Query 311 ACCCTGGTAGTCCACGCCCTAAACGAT 337
|||| |||||||||||| | ||||||
Sbjct 8202 ACCCCTGTAGTCCACGCCGTCAACGAT 8228
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1289582641984
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |