Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Auxenochlorella_20pyrenoidosa_20[genbank_20GCA_5F001430745.1_202015-
11-03] 1,346 sequences; 56,992,954 total letters
Query= AAMG01000538.1
Length=248
Score E
Sequences producing significant alignments: (Bits) Value
seq1042 105 9e-21
>seq1042
Length=398099
Score = 105 bits (116), Expect = 9e-21
Identities = 168/236 (71%), Gaps = 15/236 (6%)
Strand=Plus/Plus
Query 8 TTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACCTG 67
||||| ||||||||||| ||||| || ||||| ||| ||||| ||| ||| | ||||
Sbjct 29601 TTCCAGCACCGGGCAGGTGTCAGACCCTATACGTCGTGTTACCA-CTTAGCAGAGTCCTG 29659
Query 68 TGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACGTC 127
|||||||||||||||||||| ||| || || | || ||| | | ||
Sbjct 29660 TGTTTTTAGTAAACAGTCGCCACCCCCTTTTTTGTG---------CCACATAGATTTGT- 29709
Query 128 GTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTA 187
||||| | | || | | |||| | |||||||||||| | | |||||||| ||||||
Sbjct 29710 GTTCA--ACCTATGTC-CTCCTTTTTCCGAAGTTACGGAGGTAATTTGCCGAGTTCCTTC 29766
Query 188 ACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTA 243
| || ||| | | | |||||||| || || || | ||||| |||||||||||
Sbjct 29767 AACATGATTCTCTC-TAGGCCTTAGTTTTTTCAACAAGTCCACCAGTGTCGGTTTA 29821
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694390945458
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |