Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Auxenochlorella_20pyrenoidosa_20[genbank_20GCA_5F001430745.1_202015-
11-03] 1,346 sequences; 56,992,954 total letters
Query= AAMG01000811.1
Length=502
Score E
Sequences producing significant alignments: (Bits) Value
seq1039 434 3e-119
seq1042 264 3e-68
>seq1039
Length=107091
Score = 434 bits (480), Expect = 3e-119
Identities = 397/494 (80%), Gaps = 23/494 (5%)
Strand=Plus/Plus
Query 7 CGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCATGTGGTT 66
|||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 80133 CGCAAGAGTGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGAGCATGTGGTT 80192
Query 67 TAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACAT-CCTCTGACCCCTCTAGAG 125
|||||||| ||||||||||||||||||||| |||||||| || || || || |
Sbjct 80193 TAATTCGATGCAACGCGAAGAACCTTACCAGGACTTGACATGCCACTTTTTCC-CT---G 80248
Query 126 ATAGAGGT--TTCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTCAGCTC 183
| || || ||||| | ||||| |||||| ||||||| ||||||||||||
Sbjct 80249 AAAGGGGAAGTTCCCGA---GTGGACA------CAGGTGGTGCATGGCTGTCGTCAGCTC 80299
Query 184 GTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTGCCAT 243
||||| ||||||||||||||||||||||||||||||||||||||| | | |||||||
Sbjct 80300 GTGTCTTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTGTTTTGAATTGCCAT 80359
Query 244 CATTAAGTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTGGGGACGAC 303
||| || | || || ||||||||||||||| ||||||||||||| ||| |||
Sbjct 80360 TATTG----GGAAATTCAAAA--GACTGCCGGTGACAAGCCGGAGGAAGGTGAGGATGAC 80413
Query 304 GTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAATACAAA 363
||||| ||| ||||||||||| | ||||| |||||||||||||||||| | |||||
Sbjct 80414 GTCAAGTCAGCATGCCCCTTACGTCCTGGGCGACACACGTGCTACAATGGCCGGGACAAA 80473
Query 364 GGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGATTGTAG 423
| | || || |||||||| | ||| || | || ||| | ||||||||||||||| ||
Sbjct 80474 GAGATGCAAACCCGCGAGGGCTAGCCAACCTCAAAAACCCGGTCTCAGTTCGGATTGCAG 80533
Query 424 TCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAG-CATGCTACGG 482
|||||||||| || |||||| ||||||||||||||||| || |||| ||| || |||
Sbjct 80534 GCTGCAACTCGCCTGCATGAAGTCGGAATCGCTAGTAATCGCAGGTCAGCCATACTGCGG 80593
Query 483 TGAATACGTTCCCG 496
||||||||||||||
Sbjct 80594 TGAATACGTTCCCG 80607
>seq1042
Length=398099
Score = 264 bits (292), Expect = 3e-68
Identities = 368/511 (72%), Gaps = 25/511 (5%)
Strand=Plus/Plus
Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60
|||| |||||| | |||||||||||||| ||||||| | | |||||| |||||| |||
Sbjct 8366 TACGGTCGCAAGACTAAAACTCAAAGGAATAGACGGGGGCTCACACAAGTGGTGGAACAT 8425
Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTG------A 114
||||||||||||||| ||||||| | |||||||||| |||||||| ||| |
Sbjct 8426 GTGGTTTAATTCGAAACAACGCGCAAAACCTTACCAGTCCTTGACATAGTCTTTTTACAA 8485
Query 115 CCCCTCTAGAGATAGAGGT------TTCCCC---TTCGGGGGAC-AGAG-TGACAGGTGA 163
| |||| | ||||| | ||| || || |||| | || | |||||||
Sbjct 8486 TCTCTCTCTATCTAGAGATAATCTCTTCACCATTTTGAAGGGAGTAAAGATTACAGGTGT 8545
Query 164 TGCATGGTTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAA 223
||||||| ||||||||| |||||| |||| ||||||| |||| | || ||||| || ||
Sbjct 8546 TGCATGGCTGTCGTCAGTTCGTGTTGTGAAATGTTGGATTAATTTCCTTAACGAACGAAA 8605
Query 224 CCCTTAAGCTTAGTTGCCATCATTAAGTTGGGCACTCT---AAGTTGA----CTGCCGGT 276
||| | | | || | ||| ||| | || | || | || | || |||
Sbjct 8606 CCCCTCTTTTCA-TTCAAAACATGAAGAATGTTTCTGTTTTAAATGGAAAGACAGCTGGT 8664
Query 277 GACAAACCGGAGGAAGGTGGGGACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTA 336
|| | || |||||||| |||| ||||||| || ||||| |||||||| |||||||
Sbjct 8665 GATAGACTAGAGGAAGGGAGGGATCACGTCAAGTCCTCATGACCCTTATGGGCTGGGCTA 8724
Query 337 CACACGTGCTACAATGGACAATACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCA 396
|||||||| |||||||| | |||||| | ||| | | ||| |||||||| ||
Sbjct 8725 CACACGTGTTACAATGGTGAGGACAAAGAGGAGCAATGATGAGAGTCGGAGCAAATCTCA 8784
Query 397 TAAAGTTGTTCTCAGTTCGGATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCT 456
||| | | |||||| |||||| |||||||||||| | ||||||| |||||| ||
Sbjct 8785 AAAAACTCACCCCAGTTCAGATTGTTCTCTGCAACTCGAGAACATGAAGCCGGAATCACT 8844
Query 457 AGTAATCGTAGATCAGCATGCTACGGTGAAT 487
||||||||| |||||||| || |||||||||
Sbjct 8845 AGTAATCGTGGATCAGCACGCCACGGTGAAT 8875
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1503979756160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |