Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Auxenochlorella_20pyrenoidosa_20[genbank_20GCA_5F001430745.1_202015-
11-03] 1,346 sequences; 56,992,954 total letters
Query= AAMG01001083.1
Length=339
Score E
Sequences producing significant alignments: (Bits) Value
seq1344 212 1e-52
seq1042 132 9e-29
>seq1344
Length=3331
Score = 212 bits (234), Expect = 1e-52
Identities = 183/227 (81%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 113 GACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCGC 172
|||||| |||| |||||||||||||||||||||| ||||| ||| |||||||||| |
Sbjct 657 GACAGTTTCAGGTGGGCAGTTTGACTGGGGCGGTCACCTCCTAAAAGGTAACGGAGGTGT 598
Query 173 CCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGGTGTT 232
||||| | ||||||| |||| ||||| || || | |||| ||||||| ||||| | |
Sbjct 597 GCAAAGGTTCCCTCAGGCTGGACGGAAATCAGCCGTAGAGTGTAAAGGCAGAAGGGAGCT 538
Query 233 TGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTGC 292
||||||| | ||| |||||| ||||||| |||||| ||| |||| ||||||| |||| |
Sbjct 537 TGACTGCAAGACCTACAAGTCGAGCAGGGGCGAAAGCCGGCCTTAGTGATCCGACGGTTC 478
Query 293 TGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339
||||| ||||||||||| ||||||||||| ||| || ||||||
Sbjct 477 CATGTGGAAGGGCCGTCGCTCAACGGATAAAAGTTACTCTAGGGATA 431
>seq1042
Length=398099
Score = 132 bits (146), Expect = 9e-29
Identities = 166/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 111 GGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGC 170
||||||||| | ||| |||||||||||||||||||| ||| ||||||||||||| |
Sbjct 29221 GGGACAGTGGTAAATGGGTAGTTTGACTGGGGCGGTCGCTTCCTAAAGAGTAACGGAAGT 29162
Query 171 GCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGGTG 230
| | ||| || |||| |||| ||||| || | | || | || || | ||| ||
Sbjct 29161 GTGCGAAGGTAAGCTCAAGCTGGACGGAAATCAGCTGGAGAGCGTAATGGTAGAAGCTTG 29102
Query 231 TTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGT 290
|||||| | || |||||| ||||| |||||||||||| | || ||| |||| ||
Sbjct 29101 CCTGACTGTAAGACTTACAAGTCAAGCAGAGACGAAAGTCGGCCATAGTGACCCGGGAGT 29042
Query 291 GCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGAT 338
|| ||||| ||| ||| || |||||| |||| ||| || |||||
Sbjct 29041 TCTTGGTGGAAAGGCTCTCGATCAACGGATCAAAGGTACGCTAGGGAT 28994
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 982386776896
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |