Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Auxenochlorella_20pyrenoidosa_20[genbank_20GCA_5F001430745.1_202015-
11-03] 1,346 sequences; 56,992,954 total letters
Query= AAMG01001138.1
Length=202
Score E
Sequences producing significant alignments: (Bits) Value
seq1042 132 5e-29
seq66 95.1 1e-17
>seq1042
Length=398099
Score = 132 bits (146), Expect = 5e-29
Identities = 115/147 (78%), Gaps = 0/147 (0%)
Strand=Plus/Plus
Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84
||||||| |||| | |||| | || |||||||||| || | | |||||||||||||
Sbjct 29365 GGGTCTTACCGTCTACTTTCGGGAACTCCGCATCTTCACGGAGAATTCAATTTCACTGAG 29424
Query 85 CTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCGA 144
||| | | ||||||| ||||||||| |||||||||||||||||||||
Sbjct 29425 ATCATGTTGGAGACAGCGGGGAAGTCGTGACACCATTCATGCAGGTCGGAACTTACCCGA 29484
Query 145 CAAGGAATTTCGCTACCTTAGGACCGT 171
|||||||||||||||||||||||||||
Sbjct 29485 CAAGGAATTTCGCTACCTTAGGACCGT 29511
>seq66
Length=1359931
Score = 95.1 bits (104), Expect = 1e-17
Identities = 54/55 (98%), Gaps = 0/55 (0%)
Strand=Plus/Plus
Query 117 CCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGT 171
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1157421 CCATTCATGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGT 1157475
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547192864854
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |