Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Auxenochlorella_20pyrenoidosa_20[genbank_20GCA_5F001430745.1_202015- 11-03] 1,346 sequences; 56,992,954 total letters Query= AAMG01001138.1 Length=202 Score E Sequences producing significant alignments: (Bits) Value seq1042 132 5e-29 seq66 95.1 1e-17 >seq1042 Length=398099 Score = 132 bits (146), Expect = 5e-29 Identities = 115/147 (78%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84 ||||||| |||| | |||| | || |||||||||| || | | ||||||||||||| Sbjct 29365 GGGTCTTACCGTCTACTTTCGGGAACTCCGCATCTTCACGGAGAATTCAATTTCACTGAG 29424 Query 85 CTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCGA 144 ||| | | ||||||| ||||||||| ||||||||||||||||||||| Sbjct 29425 ATCATGTTGGAGACAGCGGGGAAGTCGTGACACCATTCATGCAGGTCGGAACTTACCCGA 29484 Query 145 CAAGGAATTTCGCTACCTTAGGACCGT 171 ||||||||||||||||||||||||||| Sbjct 29485 CAAGGAATTTCGCTACCTTAGGACCGT 29511 >seq66 Length=1359931 Score = 95.1 bits (104), Expect = 1e-17 Identities = 54/55 (98%), Gaps = 0/55 (0%) Strand=Plus/Plus Query 117 CCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGT 171 |||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1157421 CCATTCATGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGT 1157475 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547192864854