Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Auxenochlorella_20pyrenoidosa_20[genbank_20GCA_5F001430745.1_202015-
11-03] 1,346 sequences; 56,992,954 total letters
Query= AAMG01001178.1
Length=367
Score E
Sequences producing significant alignments: (Bits) Value
seq1039 228 2e-57
seq1042 201 2e-49
>seq1039
Length=107091
Score = 228 bits (252), Expect = 2e-57
Identities = 254/335 (76%), Gaps = 12/335 (4%)
Strand=Plus/Minus
Query 2 TTTACAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCA 61
||||||| || || ||||| | | |||||||||||| || |||||||||||||||
Sbjct 79690 TTTACAACCCATAGGCCTTCATCCTT-CACGCGGCATTG-CTCCGTCAGGCTTTCGCCCA 79633
Query 62 TTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGT 121
||| || ||||| |||||||||||||||||||||||||| |||||||||||| |||||
Sbjct 79632 TTGCGGAAAATTCCTCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGT 79573
Query 122 GTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCAC 181
||| ||||||||||||||||||||| ||| |||| |||||||||| |||| ||||| |||
Sbjct 79572 GTGGCTGATCATCCTCTCAGACCAGCTACTGATCATCGCCTTGGTAAGCCTTTACCCCAC 79513
Query 182 CAACTAGCTAATCCGACCTAGGCTCATCTGATAGCGCAAGGCCCGAAGGTCCCCTGCTTT 241
||||||||||||| | | | || ||||| | ||| | | || | ||
Sbjct 79512 CAACTAGCTAATCAGCCGCAAGCCCATCTCTTGGCGATTGTTC-----ATCATTTAACTT 79458
Query 242 CTCCCGTAGGACGTATGCGGTATTAGCGTCCGTTTCCGAACGTTATCCCCCACTACCAGG 301
||| || | || | ||||||||| ||||||| | ||| |||| | | | |||
Sbjct 79457 CTC----AGCA-TTACGAGGTATTAGCCATCGTTTCCAATGGTTGTCCCTCTCCAAAAGG 79403
Query 302 CAGATTCCTAGGCATTACTCACCCGTCCGCCGCTC 336
|| ||| || | ||||||||||||||||| |||
Sbjct 79402 TAGGTTCTTACGTGTTACTCACCCGTCCGCCACTC 79368
>seq1042
Length=398099
Score = 201 bits (222), Expect = 2e-49
Identities = 173/211 (82%), Gaps = 5/211 (2%)
Strand=Plus/Minus
Query 2 TTTACAATCCGAAGACCTTCTT--TCACACACGCGGCATTGGCTGGATCAGGCTTTCGCC 59
||||||| | || || |||| |||| |||||| || | ||||||||||||||||||
Sbjct 7863 TTTACAACC--AACACAGTCTTCATCACCCACGCGATATAG-CTGGATCAGGCTTTCGCC 7807
Query 60 CATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCA 119
|||||||||| ||||| |||||||||| | || | | |||||| |||||||||||| |||
Sbjct 7806 CATTGTCCAAGATTCCTCACTGCTGCCGCTCGAAAGCGTCTGGGCCGTGTCTCAGTCCCA 7747
Query 120 GTGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTC 179
||||| ||||||||||||||||||||| || ||||| | | |||||| || ||||| |
Sbjct 7746 GTGTGGCTGATCATCCTCTCAGACCAGCTAAGGATCTTTGGCTTGGTAGGCTTTTACCCC 7687
Query 180 ACCAACTAGCTAATCCGACCTAGGCTCATCT 210
|||||||| ||||||| || | ||||||||
Sbjct 7686 ACCAACTACCTAATCCTACGCAAGCTCATCT 7656
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1071985570880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |