Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Auxenochlorella_20pyrenoidosa_20[genbank_20GCA_5F001430745.1_202015-
11-03] 1,346 sequences; 56,992,954 total letters
Query= AAMG01001213.1
Length=600
Score E
Sequences producing significant alignments: (Bits) Value
seq1344 183 1e-43
seq1042 111 6e-22
>seq1344
Length=3331
Score = 183 bits (202), Expect = 1e-43
Identities = 210/282 (74%), Gaps = 23/282 (8%)
Strand=Plus/Plus
Query 324 CGCCCTATTCGGACTCGCTTTCGCTACGGCTACCCCACACGGGT---TAACCTCGCGACA 380
|||||||||| |||| ||||||||| ||||| || | || | |||||| || ||
Sbjct 2527 CGCCCTATTCAGACTTGCTTTCGCTTCGGCT-CCGGATACATTTCCTTAACCTTGCCACG 2585
Query 381 CAACGCAAACTCGCAGGCTCATTCTTCAAAAGGCACGCCGTCACCTGGTACCTAAAAGGC 440
| || |||| |||||||||||||| |||||||| |||| ||
Sbjct 2586 TTTT-CTAAGTCGCCGGCTCATTCTTCAACAGGCACGCGGTCA---------------GC 2629
Query 441 ACTTCAGC---TCCGACGGATTGTAGGCACATGGTTTCAGGTACTATTTCACTCCCCGCC 497
||| ||| ||| || | |||| ||| | ||||||| || |||||||||||||| |
Sbjct 2630 GCTTTAGCGCCTCCCACTGGTTGTCAGCATAGGGTTTCATGTTCTATTTCACTCCCCTAC 2689
Query 498 AGGGGTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCACCAAGGAGTATT 557
|||||| ||||||||||||||||||||||||| | |||||||||||||| |||||||||
Sbjct 2690 AGGGGTTCTTTTCACCTTTCCCTCACGGTACTATTTCGCTATCGGTCACCTAGGAGTATT 2749
Query 558 TAGGCTTAACGGGTGGTCCCGCCAGATTCACACGAAATTTCA 599
||| |||| |||||||| | |||||||||| ||||||
Sbjct 2750 TAGCCTTACGAGGTGGTCCTCGCTGATTCACACGGGATTTCA 2791
>seq1042
Length=398099
Score = 111 bits (122), Expect = 6e-22
Identities = 311/476 (65%), Gaps = 45/476 (9%)
Strand=Plus/Plus
Query 135 ACGCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTC 194
||||| |||| ||| |||||| || |||||||||| | ||| | ||||||| ||||
Sbjct 30554 ACGCTCTACCTCAATAGATTTCGCAGAAAACCAGCTATTTCCAAGCTCGATTGGCTTTTC 30613
Query 195 ACCCC-TATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGC 253
||||| || |||| ||||||||| || | || | |||||||||||||||||
Sbjct 30614 ACCCCATAATCACAAGTCATCCCCATCTATTGCCACAGATGTGGGTTCGGTCCTCCAAAA 30673
Query 254 GGTCTTACCCGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTTCGGGTC---TTGA- 309
|| ||| | |||||||||| |||| |||||| ||| | |||||||| || |
Sbjct 30674 CGTATTATCATTTTTTCAACCTGCTCATGATTAGATCGCTTGGTTTCGGGTCAAATTTAT 30733
Query 310 --------TCGTGCC---------ACTCATAC--GCCCTA--------TTCGGACTCGCT 342
| || | || ||| | | | || ||| || |||
Sbjct 30734 GAAACTTTTTGTTTCCCAAAAAATACACATTCTGGGCTTATGCTTTTTTTCAAGCTTGCT 30793
Query 343 TTCGCTACGGCTACCCCACACGGGTTAACCTCGCGACACAACGCAAACTCGCAGGCTCAT 402
||| || || || | | |||| || || || || |||||| | | |||
Sbjct 30794 TTCACTCCGCCTCCGTTTCTGAACTTAAGCTGGCTTCATAA-ATTTACTCGCTGACCCAT 30852
Query 403 TCTTCAAAAGGCACGCCGTCACCTGGTACCTAAAAGGCACTTCAGCTCCGACGGATTGTA 462
| | ||||||| |||||||||| | | |||| |||| |||| | |||||
Sbjct 30853 TATGCAAAAGGTACGCCGTCAC--TCTTCATAAA---------AGCTTCGACTGCTTGTA 30901
Query 463 GGCACATGGTTTCAGGTACTATTTCAC-TCCCCGCCAGGGGTACTTTTCACCTTTCCCTC 521
||| |||||||| || |||||| ||| ||| || |||||||||||||||
Sbjct 30902 AGCATTCAGTTTCAGGATCTCTTTCACTTCCTATTTAGGAGTCTGTTTCACCTTTCCCTC 30961
Query 522 ACGGTACTTGTCCGCTATCGGTCACCAAGGAGTATTTAGGCTTAACGGGTGGTCCC 577
||||||||||| | |||||| ||| | |||||||||||| ||||||||||
Sbjct 30962 ACGGTACTTGTTCACTATCGATCAGAAGACTATATTTAGGCTTAGAGGGTGGTCCC 31017
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1817575535104
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |