Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Auxenochlorella_20pyrenoidosa_20[genbank_20GCA_5F001430745.1_202015- 11-03] 1,346 sequences; 56,992,954 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq1344 161 2e-37 seq1042 150 4e-34 >seq1344 Length=3331 Score = 161 bits (178), Expect = 2e-37 Identities = 214/289 (74%), Gaps = 10/289 (3%) Strand=Plus/Plus Query 136 CGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCT---ATTCGGTTAAGCTTTGCCAC 192 ||||||| | ||||| ||||| |||| || |||| ||| |||| ||| ||||| Sbjct 2527 CGCCCTATTCAGACTTGCTTT-CGCTTCGGCTCCGGATACATTTCCTTAACCTT-GCCAC 2584 Query 193 TGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAAAGTGGGCTC 252 |||||||| | | |||| | ||| ||| |||| |||| | | | ||| Sbjct 2585 GTTTTCTAAGTCGCCGGCTCATTCTTCAACAGGCACGCGGTCAGCGCTTTAGC--GCCTC 2642 Query 253 CCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTT 312 |||||| |||| ||||| ||||||| | |||||||||||||||| | ||||||||||| Sbjct 2643 CCACTGGTTGTCAGCATAGGGTTTCATGTTCTATTTCACTCCCCTA-CAGGGGTTCTTTT 2701 Query 313 CGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTT-GGAG 371 | ||||||||||||||||||| ||| |||||||||| || ||||||||||||| ||| Sbjct 2702 CACCTTTCCCTCACGGTACTATTTCGCTATCGGTCACCTAGGAGTATTTAGCCTTACGAG 2761 Query 372 GATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTCG 420 | |||||| | | ||||| || |||| |||| || | ||||||| Sbjct 2762 G-TGGTCCTCGCTGATTCACACGGGATTTCACGTGTCCCATGCTACTCG 2809 >seq1042 Length=398099 Score = 150 bits (166), Expect = 4e-34 Identities = 149/189 (79%), Gaps = 3/189 (2%) Strand=Plus/Plus Query 195 AAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAAAGTGGGCTCCC 254 ||| | | ||||||||||||||| |||||||||||| ||||| | || | | || | Sbjct 30833 AAATTTACTCGCTGACCCATTATGCAAAAGGTACGCCGTCACTCTTCATAAAAG-CTTCG 30891 Query 255 ACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCG 314 |||||||||| |||| | |||||||||||| ||||||| || | || || |||| Sbjct 30892 ACTGCTTGTAAGCATTCAGTTTCAGGATCTCTTTCACTTCCTATTTAGGAGTCTGTTTCA 30951 Query 315 CCTTTCCCTCACGGTACTAGTTCACTATCGGTCAG-TCAGTAGTATTTAGCCTTGGAGGA 373 |||||||||||||||||| ||||||||||| |||| | || ||||||| ||| |||| Sbjct 30952 CCTTTCCCTCACGGTACTTGTTCACTATCGATCAGAAGACTA-TATTTAGGCTTAGAGGG 31010 Query 374 TGGTCCCCC 382 ||||||||| Sbjct 31011 TGGTCCCCC 31019 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1241583288064