Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Auxenochlorella_20pyrenoidosa_20[genbank_20GCA_5F001430745.1_202015-
11-03] 1,346 sequences; 56,992,954 total letters
Query= AAMG01001291.1
Length=420
Score E
Sequences producing significant alignments: (Bits) Value
seq1344 161 2e-37
seq1042 150 4e-34
>seq1344
Length=3331
Score = 161 bits (178), Expect = 2e-37
Identities = 214/289 (74%), Gaps = 10/289 (3%)
Strand=Plus/Plus
Query 136 CGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCT---ATTCGGTTAAGCTTTGCCAC 192
||||||| | ||||| ||||| |||| || |||| ||| |||| ||| |||||
Sbjct 2527 CGCCCTATTCAGACTTGCTTT-CGCTTCGGCTCCGGATACATTTCCTTAACCTT-GCCAC 2584
Query 193 TGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAAAGTGGGCTC 252
|||||||| | | |||| | ||| ||| |||| |||| | | | |||
Sbjct 2585 GTTTTCTAAGTCGCCGGCTCATTCTTCAACAGGCACGCGGTCAGCGCTTTAGC--GCCTC 2642
Query 253 CCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTT 312
|||||| |||| ||||| ||||||| | |||||||||||||||| | |||||||||||
Sbjct 2643 CCACTGGTTGTCAGCATAGGGTTTCATGTTCTATTTCACTCCCCTA-CAGGGGTTCTTTT 2701
Query 313 CGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTT-GGAG 371
| ||||||||||||||||||| ||| |||||||||| || ||||||||||||| |||
Sbjct 2702 CACCTTTCCCTCACGGTACTATTTCGCTATCGGTCACCTAGGAGTATTTAGCCTTACGAG 2761
Query 372 GATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTCG 420
| |||||| | | ||||| || |||| |||| || | |||||||
Sbjct 2762 G-TGGTCCTCGCTGATTCACACGGGATTTCACGTGTCCCATGCTACTCG 2809
>seq1042
Length=398099
Score = 150 bits (166), Expect = 4e-34
Identities = 149/189 (79%), Gaps = 3/189 (2%)
Strand=Plus/Plus
Query 195 AAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAAAGTGGGCTCCC 254
||| | | ||||||||||||||| |||||||||||| ||||| | || | | || |
Sbjct 30833 AAATTTACTCGCTGACCCATTATGCAAAAGGTACGCCGTCACTCTTCATAAAAG-CTTCG 30891
Query 255 ACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCG 314
|||||||||| |||| | |||||||||||| ||||||| || | || || ||||
Sbjct 30892 ACTGCTTGTAAGCATTCAGTTTCAGGATCTCTTTCACTTCCTATTTAGGAGTCTGTTTCA 30951
Query 315 CCTTTCCCTCACGGTACTAGTTCACTATCGGTCAG-TCAGTAGTATTTAGCCTTGGAGGA 373
|||||||||||||||||| ||||||||||| |||| | || ||||||| ||| ||||
Sbjct 30952 CCTTTCCCTCACGGTACTTGTTCACTATCGATCAGAAGACTA-TATTTAGGCTTAGAGGG 31010
Query 374 TGGTCCCCC 382
|||||||||
Sbjct 31011 TGGTCCCCC 31019
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1241583288064
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |