Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Auxenochlorella_20pyrenoidosa_20[genbank_20GCA_5F001430745.1_202015-
11-03] 1,346 sequences; 56,992,954 total letters
Query= AAMG01001432.1
Length=344
Score E
Sequences producing significant alignments: (Bits) Value
seq1039 239 9e-61
seq1042 167 5e-39
>seq1039
Length=107091
Score = 239 bits (264), Expect = 9e-61
Identities = 238/305 (78%), Gaps = 15/305 (5%)
Strand=Plus/Minus
Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60
||| | ||| | ||||| |||| ||||||| | || || || ||||||||||||||||||
Sbjct 79659 GGCATTGCTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCTCACTGCTGCCTCCCGTAG 79600
Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120
||||||||||||||||||||||||| |||||| | ||| |||||||| || ||||| |||
Sbjct 79599 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCAGACCAGCTACTGAT 79540
Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCA 180
| ||| |||||| || ||| | ||||||||| |||||| ||||| ||||||||| |
Sbjct 79539 CATCGCCTTGGTAAGCCTTTACCCCACCAACTAGCTAATCAGCCGCAAGCCCATCTCTTG 79480
Query 181 GCGATAAATCTTTGGTCAAAGAATGATGCCA-TCCTCTGACATTATGCGGTATTAGCGTT 239
|||| ||| || || || | | ||| | ||||| | ||||||||| |
Sbjct 79479 GCGA-------TTGTTC-----ATCATTTAACTTCTCAG-CATTACGAGGTATTAGCCAT 79433
Query 240 CGTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCG 299
||||||||| ||| | || ||| ||||| ||||| || ||||||||||||||||||||
Sbjct 79432 CGTTTCCAATGGTTGTCCCTCTCCAAAAGGTAGGTT-CTTACGTGTTACTCACCCGTCCG 79374
Query 300 CCACT 304
|||||
Sbjct 79373 CCACT 79369
>seq1042
Length=398099
Score = 167 bits (184), Expect = 5e-39
Identities = 139/170 (82%), Gaps = 0/170 (0%)
Strand=Plus/Minus
Query 7 GCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCT 66
|||| |||||| |||| |||||||| ||| || || |||||||||| | || | | ||||
Sbjct 7825 GCTGGATCAGGCTTTCGCCCATTGTCCAAGATTCCTCACTGCTGCCGCTCGAAAGCGTCT 7766
Query 67 GGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGG 126
||||||||||||||||||| |||||| | ||| |||||||| || |||| |||| | ||
Sbjct 7765 GGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCAGACCAGCTAAGGATCTTTGG 7706
Query 127 CTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCT 176
|||||| |||| ||| | |||||||||||||||| ||| ||| |||||
Sbjct 7705 CTTGGTAGGCTTTTACCCCACCAACTACCTAATCCTACGCAAGCTCATCT 7656
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 998386561536
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |