Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Auxenochlorella_20pyrenoidosa_20[genbank_20GCA_5F001430745.1_202015- 11-03] 1,346 sequences; 56,992,954 total letters Query= AAMG01001752.1 Length=400 Score E Sequences producing significant alignments: (Bits) Value seq1042 136 9e-30 >seq1042 Length=398099 Score = 136 bits (150), Expect = 9e-30 Identities = 145/190 (76%), Gaps = 1/190 (1%) Strand=Plus/Plus Query 212 GCTTCGGCGGATAACTTAAGCCCCGCTACATTATCGGCGCGGAATCACTT-GACCAGTGA 270 ||||||| | ||| ||| ||| ||| |||||| | || || || | ||||||||| Sbjct 30235 GCTTCGGTGAATATCTTGAGCTCCGATACATTTTAGGTGCTCCTAGACATAGACCAGTGA 30294 Query 271 GCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCA 330 |||||||||| |||| ||||||||||||||||||||| ||||||||||||||| ||| Sbjct 30295 GCTATTACGCTTTCTTAAAAGGATGGCTGCTTCCAAGCCTACCTCCTGGTTGTCTTCGCC 30354 Query 331 ACTCCACATCCTTTCCCACTGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGT 390 || |||||| ||||| || | ||| | ||||||| |||||||||||| Sbjct 30355 TAGGAACTTCCTTTTCCACTCAGAAATTGCTTGAGAACCTTAGCGTTCGATCTGGGCTGT 30414 Query 391 TTCCCTCTCG 400 |||||||||| Sbjct 30415 TTCCCTCTCG 30424 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1177584149504