Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Auxenochlorella_20pyrenoidosa_20[genbank_20GCA_5F001430745.1_202015-
11-03] 1,346 sequences; 56,992,954 total letters
Query= AAMG01001821.1
Length=161
Score E
Sequences producing significant alignments: (Bits) Value
seq1039 109 5e-22
seq1042 96.9 3e-18
>seq1039
Length=107091
Score = 109 bits (120), Expect = 5e-22
Identities = 120/160 (75%), Gaps = 0/160 (0%)
Strand=Plus/Minus
Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61
|||||||||| || ||||||| ||| || ||| || | || ||| |||||||||
Sbjct 80544 CGAGTTGCAGCCTGCAATCCGAACTGAGACCGGGTTTTTGAGGTTGGCTAGCCCTCGCGG 80485
Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121
||| || | || ||| |||||||| ||||||| |||| | |||||| |||
Sbjct 80484 GTTTGCATCTCTTTGTCCCGGCCATTGTAGCACGTGTGTCGCCCAGGACGTAAGGGGCAT 80425
Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161
| ||||||||||||||| ||||||||||||| |||||||
Sbjct 80424 GCTGACTTGACGTCATCCTCACCTTCCTCCGGCTTGTCAC 80385
>seq1042
Length=398099
Score = 96.9 bits (106), Expect = 3e-18
Identities = 118/161 (73%), Gaps = 0/161 (0%)
Strand=Plus/Minus
Query 1 TCGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCG 60
|||||||||||| |||||| | ||| | | ||| || |||| ||||| ||| |
Sbjct 8823 TCGAGTTGCAGAGAACAATCTGAACTGGGGTGAGTTTTTTGAGATTTGCTCCGACTCTCA 8764
Query 61 GGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCA 120
| || | || ||| ||||||||| ||||||| ||||| |||||||||| ||
Sbjct 8763 TCATTGCTCCTCTTTGTCCTCACCATTGTAACACGTGTGTAGCCCAGCCCATAAGGGTCA 8704
Query 121 TGAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161
|||||||||||||| ||||| |||||||| || | ||||
Sbjct 8703 TGAGGACTTGACGTGATCCCTCCCTTCCTCTAGTCTATCAC 8663
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 415994575620
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |