Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Auxenochlorella_20pyrenoidosa_20[genbank_20GCA_5F001430745.1_202015- 11-03] 1,346 sequences; 56,992,954 total letters Query= AAMG01001851.1 Length=140 Score E Sequences producing significant alignments: (Bits) Value seq1344 100 2e-19 >seq1344 Length=3331 Score = 100 bits (110), Expect = 2e-19 Identities = 109/140 (78%), Gaps = 6/140 (4%) Strand=Plus/Plus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCAT--AGCCACCGGATCACTATGACC 58 || |||||||||||||||||| |||||||||| ||| | || |||||||||| | || Sbjct 442 TAACTTTTATCCGTTGAGCGACGGCCCTTCCA--CATGGAACCGTCGGATCACTAAGGCC 499 Query 59 TGCTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT 118 |||||||| |||||| | |||| | ||| ||| |||||| | ||| |||| || |||| Sbjct 500 GGCTTTCGCCCCTGCTCGACTTGTAGGTCTTGCAGTCAAGCTCCCTTCTGCCTTTACACT 559 Query 119 ATCACTAC-GATTTCCGACC 137 | || | |||||||| || Sbjct 560 CT-ACGGCTGATTTCCGTCC 578 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 351995558200