Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Auxenochlorella_20pyrenoidosa_20[genbank_20GCA_5F001430745.1_202015-
11-03] 1,346 sequences; 56,992,954 total letters
Query= AAMG01001962.1
Length=275
Score E
Sequences producing significant alignments: (Bits) Value
seq1344 262 6e-68
seq1042 206 4e-51
>seq1344
Length=3331
Score = 262 bits (290), Expect = 6e-68
Identities = 224/275 (81%), Gaps = 1/275 (0%)
Strand=Plus/Plus
Query 2 GAGGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAG 61
|||| ||||||| ||||||||| |||||| |||||| ||| || | ||| |||||
Sbjct 106 GAGGTGGGCTTCCCACTTAGATGCTTTCAGCGGTTATCCACTCCGCACATGGCTACCCAG 165
Query 62 C-TATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTA 120
| | | | |||||| | ||||||| ||||||||| |||| ||| ||||||||||||
Sbjct 166 CGTGTACCATTGGCATGATAACTGGTATACCAGAGGTGCGTCCTTCCAGGTCCTCTCGTA 225
Query 121 CTAAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCG 180
||| ||| ||||||||||| || ||||| || |||||| |||||||||||||||
Sbjct 226 CTATGGAAGGCTCCTCTCAATGCTCTAACGCCTACACCGGATATGGACCGAACTGTCTCA 285
Query 181 CGACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGAC 240
|||||||||||||||||||| ||| || |||| |||||||||||||||||||||||||||
Sbjct 286 CGACGTTCTGAACCCAGCTCACGTACCGCTTTCATGGGCGAACAGCCCAACCCTTGGGAC 345
Query 241 CTACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275
|||| | |||||||| || || ||||||||||||
Sbjct 346 GTACTACCGCCCCAGGTTGCGATGAGCCGACATCG 380
>seq1042
Length=398099
Score = 206 bits (228), Expect = 4e-51
Identities = 205/262 (78%), Gaps = 4/262 (2%)
Strand=Plus/Plus
Query 16 GCTT-AGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGCTATGCACTTGGC 74
|||| |||||| |||||| || | | |||| ||| ||||| |||||| |||| ||||||
Sbjct 27671 GCTTGAGATGCTTTCAGCAGTTCTGCATTCCGAACGTAGCTACCCAGCGATGCCCTTGGC 27730
Query 75 AGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAGCTCC 134
|| ||||||||| ||||||||||| ||| || |||||||||||||| | || || |
Sbjct 27731 AGGACAACTGGTACACCAGAGGTTCGTCATTCTCGGTCCTCTCGTACAAGAGAATGCCAC 27790
Query 135 TCTCAAATTTCCTACG-CCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTCTGAAC 193
||||| ||| ||| ||| | |||||| ||| |||||||| |||||| || |||
Sbjct 27791 CCTCAATTTT--TACCACCCGAAAAAGATAGGATCCGTACTGTCTCACGACGTACTAAAC 27848
Query 194 CCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCAGCCCC 253
||| ||| ||| || |||| || ||||||||||| ||||||| | |||| ||||||| |
Sbjct 27849 CCAACTCACGTACCGCTTTCATCGGCGAACAGCCGAACCCTTCGAACCTTCTTCAGCTCG 27908
Query 254 AGGATGAGACGAGCCGACATCG 275
|||||| || ||| ||||||||
Sbjct 27909 AGGATGCGATGAGTCGACATCG 27930
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 780789818856
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |