Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Auxenochlorella_20pyrenoidosa_20[genbank_20GCA_5F001430745.1_202015-
11-03] 1,346 sequences; 56,992,954 total letters
Query= AAMG01002175.1
Length=414
Score E
Sequences producing significant alignments: (Bits) Value
seq1039 271 2e-70
seq1042 187 6e-45
>seq1039
Length=107091
Score = 271 bits (300), Expect = 2e-70
Identities = 315/417 (76%), Gaps = 27/417 (6%)
Strand=Plus/Minus
Query 5 TTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATT 64
|||||||||| |||||||| || | |||||||||| ||| | |||||||| ||||||||
Sbjct 79690 TTTACAACCCATAGGCCTTCATCCTTCACGCGGCATTGCTCCGTCAGGCTTTCGCCCATT 79631
Query 65 GTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGT 124
| | || ||||| |||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct 79630 GCGGAAAATTCCTCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGT 79571
Query 125 GGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCA 184
||||| |||||||||||||||||||| |||| |||||| ||| ||| ||||||| |||
Sbjct 79570 GGCTGATCATCCTCTCAGACCAGCTACTGATCATCGCCTTGGTAAGCCTTTACCCCACCA 79511
Query 185 ACTAGCTAATCCCATCTG--GGTTCATCCGATAGTGAGAGGCCCGAAGGTCCCCCTCTTT 242
|||||||||| || | | | |||| | || ||| || | || ||
Sbjct 79510 ACTAGCTAAT--CAGCCGCAAGCCCATC---TCTTG------GCGATTGT--TCATCATT 79464
Query 243 GGTCTT-GCGACGTTATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCCTCCATCAG 301
||| | | ||| | ||||||||||| |||||||| ||||| |||| ||||| ||
Sbjct 79463 TAACTTCTCAGCATTACGAGGTATTAGCCATCGTTTCCAATGGTTGTCCCTCTCCAAAAG 79404
Query 302 GCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAA--GCAGCAAGC--TG 357
| || ||| | ||||||||||||||||||||| | | || ||||||
Sbjct 79403 GTAGGTTCTTACGTGTTACTCACCCGTCCGCCACTCATTA---AATTTTGGCAAGCCAAA 79347
Query 358 CTTCCTGTTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 414
||| | ||| |||||||||||||||| || ||||||||||||||| |||||
Sbjct 79346 ATTCAT----TCGTACGACTTGCATGTGTTAAGCATGCCGCCAGCGTTCATCCTGAG 79294
>seq1042
Length=398099
Score = 187 bits (206), Expect = 6e-45
Identities = 147/176 (84%), Gaps = 0/176 (0%)
Strand=Plus/Minus
Query 21 CTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATTGTGCAATATTCCCCAC 80
|||| ||| |||||| || |||| ||||||||| |||||||||| ||| ||||| |||
Sbjct 7846 CTTCATCACCCACGCGATATAGCTGGATCAGGCTTTCGCCCATTGTCCAAGATTCCTCAC 7787
Query 81 TGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGGCTGGTCATCCTCTC 140
||||||| | || | | |||||| |||||||||||| |||||||||||| ||||||||||
Sbjct 7786 TGCTGCCGCTCGAAAGCGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTC 7727
Query 141 AGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCAACTAGCTAATCC 196
|||||||||| ||||| | | || ||| ||| ||||||| ||||||| |||||||
Sbjct 7726 AGACCAGCTAAGGATCTTTGGCTTGGTAGGCTTTTACCCCACCAACTACCTAATCC 7671
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1222383546496
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |