Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Auxenochlorella_20pyrenoidosa_20[genbank_20GCA_5F001430745.1_202015-
11-03] 1,346 sequences; 56,992,954 total letters
Query= AAMG01002180.1
Length=500
Score E
Sequences producing significant alignments: (Bits) Value
seq1039 336 7e-90
seq1042 223 1e-55
>seq1039
Length=107091
Score = 336 bits (372), Expect = 7e-90
Identities = 281/342 (82%), Gaps = 3/342 (1%)
Strand=Plus/Plus
Query 161 GCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACC 220
||| ||||||||||||||||| ||||| ||||||||||||||| |||||||||| | |
Sbjct 79494 GCGGCTGATTAGCTAGTTGGTGGGGTAAAGGCTTACCAAGGCGATGATCAGTAGCTGGTC 79553
Query 221 TGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGC 280
||||||| ||||| |||||| ||| |||||||||||| ||| ||||||||||||||||||
Sbjct 79554 TGAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGCAGC 79613
Query 281 AGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGAA 340
|||| ||||| || | |||||||| ||||||||| | ||||| ||||||||| ||||||
Sbjct 79614 AGTGAGGAATTTTCCGCAATGGGCGAAAGCCTGACGGAGCAATGCCGCGTGAAGGATGAA 79673
Query 341 GGCCTTCGGGTCGTAAAGCTCTGTCCTCAAGGAAGA--TAATGACGGTACTTGAGGAGGA 398
||||| |||| ||||| ||| | |||| ||||| | |||||||| |||||| |
Sbjct 79674 GGCCTATGGGTTGTAAACTTCTTTTCTCAGAGAAGAATTCTTGACGGTATCTGAGGAATA 79733
Query 399 AGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGG 458
||| ||||||||| ||||||||||||||||||| || ||| || ||||||||||||
Sbjct 79734 AGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAAGACAGAGGATGCAAGCGTTATCCGG 79793
Query 459 AATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTC 500
||| | | |||||||||| || |||||||| || |||||
Sbjct 79794 AATGA-TTGGGCGTAAAGCGTCTGTAGGTGGCTTAAAAAGTC 79834
>seq1042
Length=398099
Score = 223 bits (246), Expect = 1e-55
Identities = 252/334 (75%), Gaps = 3/334 (1%)
Strand=Plus/Plus
Query 161 GCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACC 220
|||| |||||| |||||||| ||||| || ||||||| | | |||| |||| | |
Sbjct 7666 GCGTAGGATTAGGTAGTTGGTGGGGTAAAAGCCTACCAAGCCAAAGATCCTTAGCTGGTC 7725
Query 221 TGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGC 280
||||||| ||||| |||||| ||| |||||||||||| ||| || | | || | ||||||
Sbjct 7726 TGAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCAGACGCTTTCGAGCGGCAGC 7785
Query 281 AGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGAA 340
|||| ||||| ||| ||||||||| |||||||||| |||| | |||||| | ||||||
Sbjct 7786 AGTGAGGAATCTTGGACAATGGGCGAAAGCCTGATCCAGCTATATCGCGTGGGTGATGAA 7845
Query 341 GGC-CTTCGGGTCGTAAAGCTCTGT-CCTCAAGGAAGATAATGACGGTACTTGAGGAGGA 398
| | | ||| ||||| | || | | || | |||| ||||| ||| | |
Sbjct 7846 GACTGTGTTGGTTGTAAAACCCTTTACTTCTTGAGAGATTATGACAAACAAGGAGAAAAA 7905
Query 399 AGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGG 458
|| |||||| || | |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct 7906 AGTCCCGGCCAATTTCGTGCCAGCAGCCGCGGTAATACGAGAGGGGCAAGCGTTATTCGG 7965
Query 459 AATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTT 492
||| | | |||||||||| | |||||| ||||
Sbjct 7966 AATGA-TTGGGCGTAAAGCGCACGTAGGCTGTTT 7998
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1497579842304
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |