Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Auxenochlorella_20pyrenoidosa_20[genbank_20GCA_5F001430745.1_202015-
11-03] 1,346 sequences; 56,992,954 total letters
Query= AAMG01002183.1
Length=408
Score E
Sequences producing significant alignments: (Bits) Value
seq1039 288 2e-75
seq1042 174 4e-41
>seq1039
Length=107091
Score = 288 bits (318), Expect = 2e-75
Identities = 306/404 (76%), Gaps = 0/404 (0%)
Strand=Plus/Plus
Query 5 TGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGC 64
|||||| |||| ||||||||| ||||||||||||||||||| || ||| || |||
Sbjct 79725 TGAGGAATAAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAAGACAGAGGATGCAAGC 79784
Query 65 GTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAA 124
|||||||||||| | ||||||||||| || |||||||| || ||||| || |||
Sbjct 79785 GTTATCCGGAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTAAAAAGTCTTCTGTCAAA 79844
Query 125 GGCTATGGCTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCA 184
| | |||| ||||| ||| | || |||||| ||||||||| | |||||||
Sbjct 79845 GATCAGGGCTTAACCCTGGGCCGGCAGGAGAAACTCTTAGGCTAGAGTTTGGTAGGGGCA 79904
Query 185 AGTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAA 244
|||||||| ||| |||||||||||||||||| || |||||||||||| ||||||
Sbjct 79905 GAGGGAATTCCCGGTGGAGCGGTGAAATGCGTAGAGATCGGGAGGAACACCAAAGGCGAA 79964
Query 245 GGCGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATT 304
|| |||||| | ||||||||||||| |||||||| |||||||||| |||||
Sbjct 79965 AGCACTCTGCTGGGCCACAACTGACACTGAGAGACGAAAGCGAGGGGAGCAAAAGGGATT 80024
Query 305 AGATACCCTGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCGCATAAGTGC 364
|||||||| ||||||| |||||||||||||| ||||||| ||| || | |||
Sbjct 80025 AGATACCCCTGTAGTCCTCGCCGTAAACGATGGATACTAGATGTTGGATAGGTTAAAGCA 80084
Query 365 TCCGGTGCCGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408
| | || || ||| ||||| |||||| || |||||||||||
Sbjct 80085 TTCAGTATCGTAGCTAACGCGTGAAGTATCCCGCCTGGGGAGTA 80128
>seq1042
Length=398099
Score = 174 bits (192), Expect = 4e-41
Identities = 237/327 (72%), Gaps = 3/327 (1%)
Strand=Plus/Plus
Query 13 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCG 72
||| |||||| || | |||||||||||||||||||||||| ||||| |||||||| ||
Sbjct 7905 AAGTCCCGGCCAATTTCGTGCCAGCAGCCGCGGTAATACGAGAGGGGCAAGCGTTATTCG 7964
Query 73 GAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCT-ATG 131
|||| | ||||||||||| | |||||| |||| || ||| | ||| || |
Sbjct 7965 GAATGATTGGGCGTAAAGCGCACGTAGGCTGTTTAGAAAATCAAAAACAAAAAACTCAAA 8024
Query 132 GCTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGGAA 191
| | | | ||| |||| | | | || ||||| || || | |||||
Sbjct 8025 GTTGTGCTTTGACACTTGTTTTCTGATTCCTAAACTTGAGTGAGTAAGAGGAGAATGGAA 8084
Query 192 TTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCT 251
||||| | |||| ||| |||| || ||||| |||||||||| || |||||||| |
Sbjct 8085 TTCCTGGCGTAGAGGTAAAATTTGTTGATATCAGGAGGAACATCAAAAGCGAAGGCAATT 8144
Query 252 TGCTGG-ACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATAC 310
|||| ||| || ||||| ||||| ||| |||||||||| |||| |||||||||||
Sbjct 8145 CTCTGGTACTCTA-CTGACGTTGAGGTGCGACAGCGTGGGGATCAAAAGGGATTAGATAC 8203
Query 311 CCTGGTAGTCCACGCCGTAAACGATGA 337
|| |||||||||||||| ||||||||
Sbjct 8204 CCCTGTAGTCCACGCCGTCAACGATGA 8230
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203183804928
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |