Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Auxenochlorella_20pyrenoidosa_20[genbank_20GCA_5F001430745.1_202015- 11-03] 1,346 sequences; 56,992,954 total letters Query= AAMG01002193.1 Length=560 Score E Sequences producing significant alignments: (Bits) Value seq1042 122 3e-25 >seq1042 Length=398099 Score = 122 bits (134), Expect = 3e-25 Identities = 306/453 (68%), Gaps = 23/453 (5%) Strand=Plus/Minus Query 35 GACCCGAAACCAAGTGATCTACCCATGGCCAGGATGAAGGTGCGGTAACACGCCCTGGAG 94 |||||||||||||| |||||| |||| |||| |||| | ||| ||| ||||| Sbjct 30725 GACCCGAAACCAAGCGATCTAATCATGAGCAGGTTGAAAAAATGATAATACGTTTTGGAG 30666 Query 95 GTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTA-GGGGTGAAAGGCT 153 | |||||||||| ||| | || | |||||||| |||| || ||||||||| || Sbjct 30665 GACCGAACCCACATCTGTGGCAATAGATGGGGATGACTTGTGATTATGGGGTGAAAAGCC 30606 Query 154 AAACAAACTTGGAAATAGCTGGTTCTCTCCGAAAACTATTTAGGTAGTGC---CTCAAGT 210 || | | ||||||||||||||||| ||| ||||| ||||| |||||| || |||| Sbjct 30605 AATCGAGCTTGGAAATAGCTGGTTTTCTGCGAAATCTATTGAGGTAGAGCGTATTCAAAA 30546 Query 211 ATCACCATCGGGGGTAGAGCACTGTTATGGCTAGGGGGTCATTGCGACTTACCAAACCAT 270 | | | || ||||||||||| | || | || | | | ||||| | || Sbjct 30545 GTAA--AAAGGAGGTAGAGCACTCATTGGGTGATGGTGGCCCAAAGCCTTACTGATCCCA 30488 Query 271 TGCAAACTCCGAATGCGCATCAGTTTTACCGCGGGAGTGAG---GGCATG-GGTGCTAAG 326 | ||||||||||||| |||| | ||| || | | | || |||||| Sbjct 30487 GGGAAACTCCGAATGC------CTTTTTATTCTGGATACAGACAGACTCGAGGCGCTAAG 30434 Query 327 GTC-CGTGCCCGAGAGGAGAAGAATCCGGA-CTATCAGCTAAGGCCCCGAAATGACAGCT 384 ||| || | ||||||| || | || || | | | ||||||| | || | || Sbjct 30433 GTCTCGAG-TCGAGAGGGAAACAGCCCAGATCGAAC-GCTAAGGTTCTCAAGCAATTTCT 30376 Query 385 AAGTTAAACTAACGAAGTCTGATTGCTAAGACAGCTAGGATGTTGGCTTGGAAGCAGCCA 444 ||| || || ||||| || |||||| | |||| || |||||||||||||||| Sbjct 30375 GAGTGGAA--AAGGAAGTTCCTAGGCGAAGACAACCAGGAGGTAGGCTTGGAAGCAGCCA 30318 Query 445 TTCATTTAAAGAGTGCGTAACAGCTCACTAGTC 477 || ||| |||| |||||| |||||||| ||| Sbjct 30317 -TCCTTTTAAGAAAGCGTAATAGCTCACTGGTC 30286 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1689577257984