Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Auxenochlorella_20pyrenoidosa_20[genbank_20GCA_5F001430745.1_202015-
11-03] 1,346 sequences; 56,992,954 total letters
Query= AAMG01002194.1
Length=319
Score E
Sequences producing significant alignments: (Bits) Value
seq1344 141 2e-31
seq1042 91.5 3e-16
>seq1344
Length=3331
Score = 141 bits (156), Expect = 2e-31
Identities = 181/243 (74%), Gaps = 11/243 (5%)
Strand=Plus/Minus
Query 10 GGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCGGG 69
||||||| ||| ||| || || ||||||||| ||| | | | ||| | ||| ||||
Sbjct 3203 GGTGGATACCTAGGCACCTAGAGACGATGAAGGGCGTGGAACCGA-CGAAACGCTTCGGG 3145
Query 70 GAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGCCCTTTGGGT 129
||| | ||||| | ||||||| ||||| |||||| ||| |||| ||| ||
Sbjct 3144 GAGCTGG-AAACAAGCAATGATCCGGAGATTCCCGAATAGGGCAACCT----CTT---GT 3093
Query 130 CATTGCATGCTGAATACATAGGTATGCAA-AGCGAACGCGGCGAACTGAAACATCTAAGT 188
|| | |||||| ||||||| | || || ||| | | |||||||||||||| |||
Sbjct 3092 ACTTCTAA-CTGAATTCATAGGTTAGAAAGAGGCAACTCAGTGAACTGAAACATCTTAGT 3034
Query 189 AGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATGGGATGAG 248
||||| ||||||||||| ||| || ||||||| |||||||||||||||||||||| ||
Sbjct 3033 AGCTGAAGGAAAAGAAAGCAAACGCGATTCCCTGAGTAGTGGCGAGCGAAATGGGAACAG 2974
Query 249 CCT 251
|||
Sbjct 2973 CCT 2971
>seq1042
Length=398099
Score = 91.5 bits (100), Expect = 3e-16
Identities = 67/78 (86%), Gaps = 0/78 (0%)
Strand=Plus/Minus
Query 171 GAACTGAAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGG 230
||||||||||||||||||| || ||||||| ||||||||||||||||| ||||||||
Sbjct 31292 GAACTGAAACATCTAAGTAACTAGAGGAAAAAAAATCAACCGAGATTCCGTGAGTAGTGG 31233
Query 231 CGAGCGAAATGGGATGAG 248
|||||||| |||| ||
Sbjct 31232 TGAGCGAAAGCGGATTAG 31215
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 918387638336
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |