Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Auxenochlorella_20pyrenoidosa_20[genbank_20GCA_5F001430745.1_202015- 11-03] 1,346 sequences; 56,992,954 total letters Query= AAMG01002223.1 Length=366 Score E Sequences producing significant alignments: (Bits) Value seq1039 192 1e-46 seq1042 136 8e-30 >seq1039 Length=107091 Score = 192 bits (212), Expect = 1e-46 Identities = 219/295 (74%), Gaps = 18/295 (6%) Strand=Plus/Minus Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCCACACGT 60 |||||||||||| |||||||||||||||||||| | || ||| |||| Sbjct 79761 GGCTGCTGGCACAGAGTTAGCCGATGCTTATTCCTCAGATACCGTCAAG----------- 79713 Query 61 GGAAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGC 120 || || ||| || | ||||||||||||||| || ||| |||||||||||||||| Sbjct 79712 --AA----TTCTTCTCTGAGAAAAGAAGTTTACAACCCATAGG-CCTTCATCCTTCACGC 79660 Query 121 TACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAG 180 | | ||| |||| || ||| |||||| || |||||||||||||||||||||||| Sbjct 79659 GGCATTGCTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCTCACTGCTGCCTCCCGTAG 79600 Query 181 GAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCAT 240 |||| ||| |||||||||||| ||| ||||| || | |||||||||| | ||| || Sbjct 79599 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCAGACCAGCTACTGAT 79540 Query 241 CGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAATGGAACGCATCCCCATC 295 | | | || ||| ||| ||||||| || |||| ||||| |||| |||||| Sbjct 79539 CATCGCCTTGGTAAGCCTTTACCCCACCAACTAGCTAATCAGCCGCAAGCCCATC 79485 >seq1042 Length=398099 Score = 136 bits (150), Expect = 8e-30 Identities = 144/190 (76%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 106 CTTCATCCTTCACGCTACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCAC 165 ||||||| ||||| | | ||||| |||| || ||| |||||| |||| ||||||||| Sbjct 7846 CTTCATCACCCACGCGATATAGCTGGATCAGGCTTTCGCCCATTGTCCAAGATTCCTCAC 7787 Query 166 TGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTC 225 ||||||| | || | | || ||| |||||||||||| ||| ||||| || | ||||||| Sbjct 7786 TGCTGCCGCTCGAAAGCGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTC 7727 Query 226 AGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAATGGAACG 285 ||| | ||| ||| | |||| ||| ||| ||||||| || |||||||||| ||| Sbjct 7726 AGACCAGCTAAGGATCTTTGGCTTGGTAGGCTTTTACCCCACCAACTACCTAATCCTACG 7667 Query 286 CATCCCCATC 295 || | |||| Sbjct 7666 CAAGCTCATC 7657 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1068785613952