Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Auxenochlorella_20pyrenoidosa_20[genbank_20GCA_5F001430745.1_202015-
11-03] 1,346 sequences; 56,992,954 total letters
Query= AAMG01002223.1
Length=366
Score E
Sequences producing significant alignments: (Bits) Value
seq1039 192 1e-46
seq1042 136 8e-30
>seq1039
Length=107091
Score = 192 bits (212), Expect = 1e-46
Identities = 219/295 (74%), Gaps = 18/295 (6%)
Strand=Plus/Minus
Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCCACACGT 60
|||||||||||| |||||||||||||||||||| | || ||| ||||
Sbjct 79761 GGCTGCTGGCACAGAGTTAGCCGATGCTTATTCCTCAGATACCGTCAAG----------- 79713
Query 61 GGAAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGC 120
|| || ||| || | ||||||||||||||| || ||| ||||||||||||||||
Sbjct 79712 --AA----TTCTTCTCTGAGAAAAGAAGTTTACAACCCATAGG-CCTTCATCCTTCACGC 79660
Query 121 TACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAG 180
| | ||| |||| || ||| |||||| || ||||||||||||||||||||||||
Sbjct 79659 GGCATTGCTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCTCACTGCTGCCTCCCGTAG 79600
Query 181 GAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCAT 240
|||| ||| |||||||||||| ||| ||||| || | |||||||||| | ||| ||
Sbjct 79599 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCAGACCAGCTACTGAT 79540
Query 241 CGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAATGGAACGCATCCCCATC 295
| | | || ||| ||| ||||||| || |||| ||||| |||| ||||||
Sbjct 79539 CATCGCCTTGGTAAGCCTTTACCCCACCAACTAGCTAATCAGCCGCAAGCCCATC 79485
>seq1042
Length=398099
Score = 136 bits (150), Expect = 8e-30
Identities = 144/190 (76%), Gaps = 0/190 (0%)
Strand=Plus/Minus
Query 106 CTTCATCCTTCACGCTACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCAC 165
||||||| ||||| | | ||||| |||| || ||| |||||| |||| |||||||||
Sbjct 7846 CTTCATCACCCACGCGATATAGCTGGATCAGGCTTTCGCCCATTGTCCAAGATTCCTCAC 7787
Query 166 TGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTC 225
||||||| | || | | || ||| |||||||||||| ||| ||||| || | |||||||
Sbjct 7786 TGCTGCCGCTCGAAAGCGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTC 7727
Query 226 AGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAATGGAACG 285
||| | ||| ||| | |||| ||| ||| ||||||| || |||||||||| |||
Sbjct 7726 AGACCAGCTAAGGATCTTTGGCTTGGTAGGCTTTTACCCCACCAACTACCTAATCCTACG 7667
Query 286 CATCCCCATC 295
|| | ||||
Sbjct 7666 CAAGCTCATC 7657
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1068785613952
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |