Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Auxenochlorella_20pyrenoidosa_20[genbank_20GCA_5F001430745.1_202015- 11-03] 1,346 sequences; 56,992,954 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq1168 114 1e-20 >seq1168 Length=1683484 Score = 114 bits (126), Expect = 1e-20 Identities = 134/181 (74%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 61286 CGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATGT 61345 || ||||||| ||||||||||||||||| ||||| ||||| ||||| ||||||| Sbjct 215433 CGCAGGCGCGCGCCTTCTACGGCTTCCAGATCGCCATCGAGAACATCCACAGCGAGATGT 215492 Query 61346 ACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGAACGTGAACGATTGTTCAATG 61405 |||| | || | || |||||||||| ||| | ||| || || ||||| | | Sbjct 215493 ACAGCCTGCTGCTGGAGACGTACATCAAGGACAGCAAGGAGAAGGACCGGCTGTTCCACG 215552 Query 61406 CCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTGGATCACCA 61465 ||||| ||||| | || | ||||||| ||| || || ||||| |||| |||||||||| Sbjct 215553 CCATCCAGACGGTGCCCGTGGTGAAGAAGAAGGCAGAGTGGGCGCTCAAGTGGATCACCA 215612 Query 61466 G 61466 | Sbjct 215613 G 215613 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397561478145440