Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20prasinos_20[genbank_20GCA_5F002220235.1_202012-11-22] 21 sequences; 15,074,320 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq3 201 5e-49 >seq3 Length=741603 Score = 201 bits (222), Expect = 5e-49 Identities = 222/297 (75%), Gaps = 19/297 (6%) Strand=Plus/Minus Query 387 TGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATG 446 ||||| || |||| | | ||||||| | |||||||||||||||||||||||| | || Sbjct 36725 TGGCGGAAAGGTTTGCATTGACCCGTCTAGAAACACGGACCAAGGAGTCTAACATGTGTG 36666 Query 447 CGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGTG 506 ||||| |||||||||||||| | | || |||| ||||| Sbjct 36665 CGAGTCGGTGGGTGTCAAACCCACGAGG--------------CGCAGGT---AACCCA-- 36625 Query 507 AGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGT 566 | | || |||||||| | | |||| | | || | ||||||| ||||||| || Sbjct 36624 ACTGAACAACATCGACCAACCATGATCTTCTGTGAAAGGTTTGAGTGCGAGCATACATGC 36565 Query 567 TGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTG 626 ||||||||||||||||||||||||||||||| |||| |||||| |||||||||| |||| Sbjct 36564 TGGGACCCGAAAGATGGTGAACTATGCCTGAGCAGGGCGAAGCCGGAGGAAACTCCGGTG 36505 Query 627 GAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 |||||||| ||| | ||| ||||||||||| | |||| | |||||||||||||||| Sbjct 36504 GAGGCTCGAAGCAATACTGACGTGCAAATCGTTTGTCAGACTTGGGTATAGGGGCGA 36448 Score = 201 bits (222), Expect = 5e-49 Identities = 222/297 (75%), Gaps = 19/297 (6%) Strand=Plus/Plus Query 387 TGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATG 446 ||||| || |||| | | ||||||| | |||||||||||||||||||||||| | || Sbjct 123115 TGGCGGAAAGGTTTGCATTGACCCGTCTAGAAACACGGACCAAGGAGTCTAACATGTGTG 123174 Query 447 CGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGTG 506 ||||| |||||||||||||| | | || |||| ||||| Sbjct 123175 CGAGTCGGTGGGTGTCAAACCCACGAGG--------------CGCAGGT---AACCCA-- 123215 Query 507 AGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGT 566 | | || |||||||| | | |||| | | || | ||||||| ||||||| || Sbjct 123216 ACTGAACAACATCGACCAACCATGATCTTCTGTGAAAGGTTTGAGTGCGAGCATACATGC 123275 Query 567 TGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTG 626 ||||||||||||||||||||||||||||||| |||| |||||| |||||||||| |||| Sbjct 123276 TGGGACCCGAAAGATGGTGAACTATGCCTGAGCAGGGCGAAGCCGGAGGAAACTCCGGTG 123335 Query 627 GAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 |||||||| ||| | ||| ||||||||||| | |||| | |||||||||||||||| Sbjct 123336 GAGGCTCGAAGCAATACTGACGTGCAAATCGTTTGTCAGACTTGGGTATAGGGGCGA 123392 Score = 197 bits (218), Expect = 6e-48 Identities = 148/174 (85%), Gaps = 0/174 (0%) Strand=Plus/Minus Query 35 TCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGC 94 |||| |||||| |||||||||||||||||| |||| || |||||||| | ||||| || Sbjct 37000 TCGAGGAGTCGGGTTGTTTGGGAATGCAGCCCTAAGCAGGTGGTAAATTCCATCTAAGGC 36941 Query 95 TAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTT 154 ||||||||||| |||||||||||||| ||||||| |||| ||||||||||||| ||| Sbjct 36940 TAAATATTGGCGAGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGATGAAAAGACCTT 36881 Query 155 TGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACC 208 || |||||||||||||||| || |||||||||||| |||||||| || |||| Sbjct 36880 TGAAAAGAGAGTTAAAAAGTACCTGAAATTGTTGAGGGGGAAGCGATTCAAACC 36827 Score = 197 bits (218), Expect = 6e-48 Identities = 148/174 (85%), Gaps = 0/174 (0%) Strand=Plus/Plus Query 35 TCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGC 94 |||| |||||| |||||||||||||||||| |||| || |||||||| | ||||| || Sbjct 122840 TCGAGGAGTCGGGTTGTTTGGGAATGCAGCCCTAAGCAGGTGGTAAATTCCATCTAAGGC 122899 Query 95 TAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTT 154 ||||||||||| |||||||||||||| ||||||| |||| ||||||||||||| ||| Sbjct 122900 TAAATATTGGCGAGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGATGAAAAGACCTT 122959 Query 155 TGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACC 208 || |||||||||||||||| || |||||||||||| |||||||| || |||| Sbjct 122960 TGAAAAGAGAGTTAAAAAGTACCTGAAATTGTTGAGGGGGAAGCGATTCAAACC 123013 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079999549550