Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20prasinos_20[genbank_20GCA_5F002220235.1_202012-11-22] 21 sequences; 15,074,320 total letters Query= AAMG01000538.1 Length=248 Score E Sequences producing significant alignments: (Bits) Value seq21 98.7 1e-18 >seq21 Length=72700 Score = 98.7 bits (108), Expect = 1e-18 Identities = 169/247 (68%), Gaps = 25/247 (10%) Strand=Plus/Plus Query 2 TTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACG 61 ||| ||||| ||| ||||||| ||||| || |||| ||| ||| | | ||| || Sbjct 55626 TTAACCTTCTGGCACTGGGCAGGTGTCAGCCCCCATACTTCGTCTTGC-GACTTTGCGGA 55684 Query 62 GACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAA 121 ||||||||||||| |||||||||||| | ||| ||| ||||| || Sbjct 55685 GACCTGTGTTTTTGGTAAACAGTCGCCTGGATCTCTTCACTGCGGCCC------------ 55732 Query 122 CACGTCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAAT 181 || || || ||||| | |||| |||||| ||| | |||| |||||||| | Sbjct 55733 -------TTTAC----AG-GGCACTCTTTCTTCCGAAGGTACAGAGCCAATTTGCCGAGT 55780 Query 182 TCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTT 241 |||||| | |||| | || | ||||||| | || ||| |||||||||||||| Sbjct 55781 TCCTTAGAGAGAGTTATCTCGCTCCCCTTAGTTTATTCAACCCACTCACCTGTGTCGGTT 55840 Query 242 TACGGTA 248 ||||||| Sbjct 55841 TACGGTA 55847 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694399858733