Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20prasinos_20[genbank_20GCA_5F002220235.1_202012-11-22] 21 sequences; 15,074,320 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq21 203 8e-50 seq20 159 9e-37 >seq21 Length=72700 Score = 203 bits (224), Expect = 8e-50 Identities = 207/269 (77%), Gaps = 2/269 (1%) Strand=Plus/Plus Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTT 72 |||||||||||| |||| ||||||| ||||||| ||||||| | |||||| Sbjct 55442 GCATCTTCACAGATATTTTTATTTCACCGAGTCTCTCTCTGAGACAGTATCCAGATCGTT 55501 Query 73 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 132 || || ||||||| ||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 55502 ACACCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACAGTTA 55561 Query 133 TTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTC--GCGTTAGCTAACCCCA 190 | ||||| ||||||||| ||| ||||||| | |||||| || | ||| Sbjct 55562 TAGTTACTGCCGCCGTTCACCAGGGCTTCAGTTGTCAGCTTCATCCGAAGATTGACCAAC 55621 Query 191 TCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTTGC 250 | ||||||||| ||||| ||||||| |||| ||| |||| || ||| || ||||| Sbjct 55622 TTCTTTAACCTTCTGGCACTGGGCAGGTGTCAGCCCCCATACTTCGTCTTGCGACTTTGC 55681 Query 251 AGAGTGCTGTGTTTTTAATAAACAGTCGC 279 ||| |||||||||| ||||||||||| Sbjct 55682 GGAGACCTGTGTTTTTGGTAAACAGTCGC 55710 >seq20 Length=43614 Score = 159 bits (176), Expect = 9e-37 Identities = 199/269 (74%), Gaps = 14/269 (5%) Strand=Plus/Plus Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTT 72 |||||| ||| | || ||||||||||||||||| ||||||||| | || |||||| Sbjct 13948 GCATCTGCACGGAGAATTCAATTTCACTGAGTCCATACTGGAGACAGTGGGGCAATCGTT 14007 Query 73 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 132 ||||| ||| |||||||| | | ||| | ||||| |||||||||||| ||| || |||| Sbjct 14008 ACGCCTTTCATGCAGGTCAGGAATTAGCTGACAATGAATTTCGCTACTTTATGATTGTTA 14067 Query 133 TTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTAGC-TAACCCCAT 191 | ||||| ||||||||||| || |||| |||| | || | || ||| Sbjct 14068 TAGTTACAACCGCCGTTTACTAGGCCTTC--TCAATA---------TACCAAAAAAGCAT 14116 Query 192 -CA-ATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTTG 249 || |||| |||| ||||||||||||||||| ||||||||| || || | |||| Sbjct 14117 ACAGGTTAAGCTTCAAGCACCGGGCAGGCGTCAGACCCTATACTTCATGTTCCCATTTTG 14176 Query 250 CAGAGTGCTGTGTTTTTAATAAACAGTCG 278 |||||| || |||||| |||| ||||| Sbjct 14177 CAGAGTCCTAATTTTTTAGTAAAAAGTCG 14205 Score = 159 bits (176), Expect = 9e-37 Identities = 199/269 (74%), Gaps = 14/269 (5%) Strand=Plus/Minus Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTT 72 |||||| ||| | || ||||||||||||||||| ||||||||| | || |||||| Sbjct 41494 GCATCTGCACGGAGAATTCAATTTCACTGAGTCCATACTGGAGACAGTGGGGCAATCGTT 41435 Query 73 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 132 ||||| ||| |||||||| | | ||| | ||||| |||||||||||| ||| || |||| Sbjct 41434 ACGCCTTTCATGCAGGTCAGGAATTAGCTGACAATGAATTTCGCTACTTTATGATTGTTA 41375 Query 133 TTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTAGC-TAACCCCAT 191 | ||||| ||||||||||| || |||| |||| | || | || ||| Sbjct 41374 TAGTTACAACCGCCGTTTACTAGGCCTTC--TCAATA---------TACCAAAAAAGCAT 41326 Query 192 -CA-ATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTTG 249 || |||| |||| ||||||||||||||||| ||||||||| || || | |||| Sbjct 41325 ACAGGTTAAGCTTCAAGCACCGGGCAGGCGTCAGACCCTATACTTCATGTTCCCATTTTG 41266 Query 250 CAGAGTGCTGTGTTTTTAATAAACAGTCG 278 |||||| || |||||| |||| ||||| Sbjct 41265 CAGAGTCCTAATTTTTTAGTAAAAAGTCG 41237 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260799735232