Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20prasinos_20[genbank_20GCA_5F002220235.1_202012-11-22] 21 sequences; 15,074,320 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq21 313 5e-83 seq20 165 2e-38 >seq21 Length=72700 Score = 313 bits (346), Expect = 5e-83 Identities = 281/353 (80%), Gaps = 15/353 (4%) Strand=Plus/Plus Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66 |||||||||| | ||| |||||||||||||| | ||||||||| ||| |||||| Sbjct 55442 GCATCTTCACAGATATTTTTATTTCACCGAGTCTCTCTCTGAGACAGTATCCAGATCGTT 55501 Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126 || |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 55502 ACACCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACAGTTA 55561 Query 127 TAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTC-------GATTGCTCTAA 179 ||||||| ||||||||| || |||||| |||| | ||||| ||||| | Sbjct 55562 TAGTTACTGCCGCCGTTCACCAGGGCTTCAGTTGTCAGCTTCATCCGAAGATTG-----A 55616 Query 180 CAGATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGAC 239 | | | ||||||||| |||| ||||||| |||||| || |||| |||||||||||| Sbjct 55617 CCAACTTCTTTAACCTTCTGGCACTGGGCAGGTGTCAGCCCCCATACTTCGTCTTGCGAC 55676 Query 240 TTAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCTGTCA 299 || || || ||||||||||||||||||||||||| ||| || ||| |||||||| | | Sbjct 55677 TTTGCGGAGACCTGTGTTTTTGGTAAACAGTCGCCTGGATCTCTTCACTGCGGCCCTTTA 55736 Query 300 TAGACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTA 352 || ||||| | |||| || ||| ||| | | || |||||||||||||||| Sbjct 55737 CAG---GGCACTCTTTCTTCCGAAGGTACAGAGCCAATTTGCCGAGTTCCTTA 55786 >seq20 Length=43614 Score = 165 bits (182), Expect = 2e-38 Identities = 255/360 (71%), Gaps = 17/360 (5%) Strand=Plus/Plus Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66 |||||| ||| | || | ||||||||| ||||| || | ||||||||| ||||||| Sbjct 13948 GCATCTGCACGGAGAATTCAATTTCACTGAGTCCATACTGGAGACAGTGGGGCAATCGTT 14007 Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126 ||||||||| ||| |||| | | ||| | ||||| |||||||||||| ||| || |||| Sbjct 14008 ACGCCTTTCATGCAGGTCAGGAATTAGCTGACAATGAATTTCGCTACTTTATGATTGTTA 14067 Query 127 TAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAACAGATCC 186 ||||||| |||||||||||| || ||| ||| | | | | |||| Sbjct 14068 TAGTTACAACCGCCGTTTACTAGGCCTT---CTCAATATACCAAAAAAGCATACAG---- 14120 Query 187 CCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGCAG 246 |||| |||| ||||||||||||||||||| ||||||| || | || | | || |||| Sbjct 14121 -GTTAAGCTTCAAGCACCGGGCAGGCGTCAGACCCTATACTTCATGTTCCCATTTTGCAG 14179 Query 247 AAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCTGTCA--TAGAC 304 | ||| ||||| ||||| ||||| | || ||| | || ||||| | | Sbjct 14180 AGTCCTAATTTTTTAGTAAAAAGTCG-TCACCCCCATT-TTTG-----TGTCACCAAAAT 14232 Query 305 AGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTAACAATAGTTCTC 364 ||| || |||| || ||| ||| || | ||||||||||||||| | || |||||| Sbjct 14233 TGGCTTCCTTTCTTCCAAAGGTACAGGAAAAATTTGCCGAGTTCCTTCAATATGGTTCTC 14292 Score = 165 bits (182), Expect = 2e-38 Identities = 255/360 (71%), Gaps = 17/360 (5%) Strand=Plus/Minus Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66 |||||| ||| | || | ||||||||| ||||| || | ||||||||| ||||||| Sbjct 41494 GCATCTGCACGGAGAATTCAATTTCACTGAGTCCATACTGGAGACAGTGGGGCAATCGTT 41435 Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126 ||||||||| ||| |||| | | ||| | ||||| |||||||||||| ||| || |||| Sbjct 41434 ACGCCTTTCATGCAGGTCAGGAATTAGCTGACAATGAATTTCGCTACTTTATGATTGTTA 41375 Query 127 TAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAACAGATCC 186 ||||||| |||||||||||| || ||| ||| | | | | |||| Sbjct 41374 TAGTTACAACCGCCGTTTACTAGGCCTT---CTCAATATACCAAAAAAGCATACAG---- 41322 Query 187 CCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGCAG 246 |||| |||| ||||||||||||||||||| ||||||| || | || | | || |||| Sbjct 41321 -GTTAAGCTTCAAGCACCGGGCAGGCGTCAGACCCTATACTTCATGTTCCCATTTTGCAG 41263 Query 247 AAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCTGTCA--TAGAC 304 | ||| ||||| ||||| ||||| | || ||| | || ||||| | | Sbjct 41262 AGTCCTAATTTTTTAGTAAAAAGTCG-TCACCCCCATT-TTTG-----TGTCACCAAAAT 41210 Query 305 AGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTAACAATAGTTCTC 364 ||| || |||| || ||| ||| || | ||||||||||||||| | || |||||| Sbjct 41209 TGGCTTCCTTTCTTCCAAAGGTACAGGAAAAATTTGCCGAGTTCCTTCAATATGGTTCTC 41150 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1062399776896