Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20prasinos_20[genbank_20GCA_5F002220235.1_202012-11-22] 21 sequences; 15,074,320 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq3 331 1e-88 >seq3 Length=741603 Score = 331 bits (366), Expect = 1e-88 Identities = 230/258 (89%), Gaps = 5/258 (2%) Strand=Plus/Plus Query 3 CTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGAC 62 |||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 38173 CTCGTTGAGTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGAC 38232 Query 63 CTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCA 122 ||||||||||||||||||||||| ||| | || ||||||||||||||||| | || | Sbjct 38233 CTGTTATTGCCTCAAACTTCCATGTGCTAAACGCACATAGTCCCTCTAAGAAGTC-GCGA 38291 Query 123 CC--AACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTA 180 || || |||| | | |||||||||||| | ||||||||||||||| |||||||| Sbjct 38292 CCCTAAGAATAG--GGCCGTACTATTTAGCAGGCTGAGGTCTCGTTCGTTAACGGAATTA 38349 Query 181 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 38350 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 38409 Query 241 AAGAGCTATCAATCTGTC 258 ||||||| |||||||||| Sbjct 38410 AAGAGCTCTCAATCTGTC 38427 Score = 331 bits (366), Expect = 1e-88 Identities = 230/258 (89%), Gaps = 5/258 (2%) Strand=Plus/Minus Query 3 CTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGAC 62 |||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121667 CTCGTTGAGTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGAC 121608 Query 63 CTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCA 122 ||||||||||||||||||||||| ||| | || ||||||||||||||||| | || | Sbjct 121607 CTGTTATTGCCTCAAACTTCCATGTGCTAAACGCACATAGTCCCTCTAAGAAGTC-GCGA 121549 Query 123 CC--AACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTA 180 || || |||| | | |||||||||||| | ||||||||||||||| |||||||| Sbjct 121548 CCCTAAGAATAG--GGCCGTACTATTTAGCAGGCTGAGGTCTCGTTCGTTAACGGAATTA 121491 Query 181 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121490 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 121431 Query 241 AAGAGCTATCAATCTGTC 258 ||||||| |||||||||| Sbjct 121430 AAGAGCTCTCAATCTGTC 121413 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796799837901