Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20prasinos_20[genbank_20GCA_5F002220235.1_202012-11-22] 21 sequences; 15,074,320 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq3 372 5e-101 seq21 87.8 3e-15 >seq3 Length=741603 Score = 372 bits (412), Expect = 5e-101 Identities = 250/278 (90%), Gaps = 1/278 (0%) Strand=Plus/Plus Query 12 ATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAA 71 ||||| |||| || || || | |||||||||||||||||||||||| |||||||||| Sbjct 34403 ATTACTCTTGGAGC-ACAACCAACGGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAA 34461 Query 72 ACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCG 131 ||||||||||||||||||||| ||||||||||||||| || ||| |||||||||||||| Sbjct 34462 ACCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCTACACTTGGCGAATTCTGCTTCG 34521 Query 132 GTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGC 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 34522 CAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGC 34581 Query 192 TGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAG 251 |||||||||||||||||||||||||||||||||||| |||||||||| ||||||| ||| Sbjct 34582 TGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCGTCAAATTCCGAC 34641 Query 252 GGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGT 289 ||||||||||||||||||| |||||| |||||| Sbjct 34642 AAGCTAAAGGATCGATAGGCCATGCTTTCACAGTTTGT 34679 Score = 372 bits (412), Expect = 5e-101 Identities = 250/278 (90%), Gaps = 1/278 (0%) Strand=Plus/Minus Query 12 ATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAA 71 ||||| |||| || || || | |||||||||||||||||||||||| |||||||||| Sbjct 125437 ATTACTCTTGGAGC-ACAACCAACGGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAA 125379 Query 72 ACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCG 131 ||||||||||||||||||||| ||||||||||||||| || ||| |||||||||||||| Sbjct 125378 ACCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCTACACTTGGCGAATTCTGCTTCG 125319 Query 132 GTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGC 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 125318 CAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGC 125259 Query 192 TGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAG 251 |||||||||||||||||||||||||||||||||||| |||||||||| ||||||| ||| Sbjct 125258 TGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCGTCAAATTCCGAC 125199 Query 252 GGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGT 289 ||||||||||||||||||| |||||| |||||| Sbjct 125198 AAGCTAAAGGATCGATAGGCCATGCTTTCACAGTTTGT 125161 >seq21 Length=72700 Score = 87.8 bits (96), Expect = 3e-15 Identities = 130/182 (71%), Gaps = 7/182 (4%) Strand=Plus/Plus Query 47 ACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCC-CTATTAGTGGGTGAACAA 105 || || |||||||| |||| ||| |||||||||||||| || || | |||| ||||| Sbjct 54868 ACCAAACTGTCTCACGACGTTCTGAACCCAGCTCACGTACCGCTTTCTATGGGCGAACAG 54927 Query 106 TCCAACGCTT---ACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATC 162 ||||| ||| || | ||| ||| | | ||| || ||||||||||||| | | Sbjct 54928 CCCAACCCTTGGAACGTACTTCCGCTCCAGGATGC---GACGAGCCGACATCGAGGTGCC 54984 Query 163 AAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTT 222 ||| | ||||| | ||||| ||||| | | |||| ||||||||| ||||||| Sbjct 54985 AAACCTCCCCGTCGATGTGAACTCTTGGGGGAGATTAGCCTGTTATCCCTAGAGTAACTT 55044 Query 223 TT 224 || Sbjct 55045 TT 55046 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854399820576